Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 RNU6-500P-201ENST00000362349 107 ntBASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 Y_RNA.41-201ENST00000362646 102 ntBASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 RNU6-1283P-201ENST00000365314 105 ntBASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 RNA5SP80-201ENST00000410475 111 ntBASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 AC007899.1-201ENST00000412776 775 ntBASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 AC013404.1-201ENST00000413068 249 ntBASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 AC105402.1-201ENST00000413336 545 ntBASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 AL929472.1-201ENST00000417484 429 ntBASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 Z99497.1-201ENST00000421282 135 ntBASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 OR6K4P-201ENST00000423179 955 ntBASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 GAPDHP34-201ENST00000432112 823 ntBASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 AC064862.5-201ENST00000440618 334 ntBASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 FAR2P1-206ENST00000449736 709 ntBASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 AC015524.1-201ENST00000491585 472 ntBASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 AC087883.1-201ENST00000551882 391 ntBASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 MTCO3P24-201ENST00000572729 782 ntBASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 ARGFXP2-201ENST00000579304 949 ntBASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 MIR212-201ENST00000586026 110 ntBASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 AC103881.1-201ENST00000603476 538 ntBASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 AC004890.3-201ENST00000605566 1095 ntBASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 AC069545.1-201ENST00000605671 358 ntBASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 AC008498.1-201ENST00000613012 531 ntBASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 HTR1DP1-201ENST00000616500 888 ntBASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 AL357562.1-201ENST00000624911 609 ntBASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 AL008636.1-201ENST00000625038 1018 ntBASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 AC068213.1-201ENST00000625124 226 ntBASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 AC244258.1-201ENST00000637553 1071 ntBASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 MAPK10-344ENST00000641718 3746 ntBASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 PPIAP24-201ENST00000328558 471 ntBASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 ZNF603P-201ENST00000405613 487 ntBASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 NACAP7-201ENST00000407371 609 ntBASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 TPMTP3-201ENST00000411928 735 ntBASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 MTCYBP38-201ENST00000417160 1123 ntBASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 OFD1P2Y-201ENST00000421895 1149 ntBASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 PMS2P9-201ENST00000441237 515 ntBASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 GAPDHP33-201ENST00000443168 1013 ntBASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 MTCO2P25-201ENST00000447065 681 ntBASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 TVP23CP1-201ENST00000450317 639 ntBASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 ZNF114P1-201ENST00000453500 292 ntBASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 RN7SL393P-201ENST00000463588 296 ntBASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 RN7SL561P-201ENST00000488553 281 ntBASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 MTAPP1-201ENST00000489154 819 ntBASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms