Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 INTS6P1-201ENST00000504674 2530 ntBASIC7.18□□□□□ -1.26
CCDC7Q96M83 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
CCDC7Q96M83 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC7Q96M83 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC7Q96M83 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
CCDC7Q96M83 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC7Q96M83 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC7.18□□□□□ -1.26
CCDC7Q96M83 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
CCDC7Q96M83 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
CCDC7Q96M83 SNORA51.8-201ENST00000384234 132 ntBASIC7.18□□□□□ -1.26
CCDC7Q96M83 RNA5SP187-201ENST00000384400 119 ntBASIC7.18□□□□□ -1.26
CCDC7Q96M83 MIR141-201ENST00000384975 95 ntBASIC7.18□□□□□ -1.26
CCDC7Q96M83 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC7Q96M83 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC7.18□□□□□ -1.26
CCDC7Q96M83 AC009238.2-201ENST00000431026 355 ntBASIC7.18□□□□□ -1.26
CCDC7Q96M83 RPS29P10-201ENST00000439197 166 ntBASIC7.18□□□□□ -1.26
CCDC7Q96M83 MGST2-204ENST00000506797 634 ntTSL 2 BASIC7.18□□□□□ -1.26
CCDC7Q96M83 GTF2F2P1-201ENST00000511083 675 ntBASIC7.18□□□□□ -1.26
CCDC7Q96M83 AC012400.1-201ENST00000518452 381 ntBASIC7.18□□□□□ -1.26
CCDC7Q96M83 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC7.18□□□□□ -1.26
CCDC7Q96M83 uc_338.18-201ENST00000615451 175 ntBASIC7.18□□□□□ -1.26
CCDC7Q96M83 AC099494.2-201ENST00000623371 978 ntBASIC7.18□□□□□ -1.26
CCDC7Q96M83 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
CCDC7Q96M83 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC7Q96M83 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC7.18□□□□□ -1.26
CCDC7Q96M83 AC004817.4-201ENST00000602396 3625 ntBASIC7.18□□□□□ -1.26
CCDC7Q96M83 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC7Q96M83 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC7Q96M83 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC7Q96M83 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC7.17□□□□□ -1.26
CCDC7Q96M83 AP005432.1-201ENST00000580891 3485 ntBASIC7.17□□□□□ -1.26
CCDC7Q96M83 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
CCDC7Q96M83 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC7Q96M83 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC7Q96M83 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC7.17□□□□□ -1.26
CCDC7Q96M83 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC7Q96M83 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC7Q96M83 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
CCDC7Q96M83 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC7Q96M83 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
CCDC7Q96M83 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC7Q96M83 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC7.17□□□□□ -1.26
CCDC7Q96M83 VTI1BP4-201ENST00000427516 527 ntBASIC7.17□□□□□ -1.26
CCDC7Q96M83 AC009220.1-201ENST00000451614 275 ntBASIC7.17□□□□□ -1.26
CCDC7Q96M83 TBCA-207ENST00000520039 157 ntTSL 3 BASIC7.17□□□□□ -1.26
CCDC7Q96M83 NELL2-211ENST00000548826 559 ntTSL 2 BASIC7.17□□□□□ -1.26
CCDC7Q96M83 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC7.17□□□□□ -1.26
CCDC7Q96M83 AC019322.1-201ENST00000571869 389 ntBASIC7.17□□□□□ -1.26
CCDC7Q96M83 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC7.17□□□□□ -1.26
CCDC7Q96M83 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC7.17□□□□□ -1.26
CCDC7Q96M83 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC7.17□□□□□ -1.26
CCDC7Q96M83 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC7.17□□□□□ -1.26
CCDC7Q96M83 AC012618.3-205ENST00000637896 1496 ntBASIC7.17□□□□□ -1.26
CCDC7Q96M83 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
CCDC7Q96M83 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC7Q96M83 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CCDC7Q96M83 AP000473.2-201ENST00000602659 1537 ntBASIC7.16□□□□□ -1.26
CCDC7Q96M83 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC7.16□□□□□ -1.26
CCDC7Q96M83 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CCDC7Q96M83 SNURFL-201ENST00000309296 343 ntBASIC7.16□□□□□ -1.26
CCDC7Q96M83 OR8V1P-201ENST00000395193 873 ntBASIC7.16□□□□□ -1.26
CCDC7Q96M83 RPL21P67-201ENST00000402896 478 ntBASIC7.16□□□□□ -1.26
CCDC7Q96M83 AL390316.1-201ENST00000406279 553 ntBASIC7.16□□□□□ -1.26
CCDC7Q96M83 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC7.16□□□□□ -1.26
CCDC7Q96M83 MRPS21P2-201ENST00000424704 264 ntBASIC7.16□□□□□ -1.26
CCDC7Q96M83 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC7.16□□□□□ -1.26
CCDC7Q96M83 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC7.16□□□□□ -1.26
CCDC7Q96M83 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC7.16□□□□□ -1.26
CCDC7Q96M83 CEACAMP9-201ENST00000442990 513 ntBASIC7.16□□□□□ -1.26
CCDC7Q96M83 RPL21P133-201ENST00000443666 476 ntBASIC7.16□□□□□ -1.26
CCDC7Q96M83 TRY2P-201ENST00000448860 689 ntBASIC7.16□□□□□ -1.26
CCDC7Q96M83 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC7.16□□□□□ -1.26
CCDC7Q96M83 AC009127.1-201ENST00000467090 155 ntBASIC7.16□□□□□ -1.26
CCDC7Q96M83 PPP1R11P1-201ENST00000486095 376 ntBASIC7.16□□□□□ -1.26
CCDC7Q96M83 MYL12BP2-201ENST00000503948 512 ntBASIC7.16□□□□□ -1.26
CCDC7Q96M83 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC7.16□□□□□ -1.26
CCDC7Q96M83 CASC19-203ENST00000523510 575 ntTSL 3 BASIC7.16□□□□□ -1.26
CCDC7Q96M83 AC063949.1-201ENST00000552900 865 ntBASIC7.16□□□□□ -1.26
CCDC7Q96M83 NOP10-202ENST00000557912 436 ntTSL 2 BASIC7.16□□□□□ -1.26
CCDC7Q96M83 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
CCDC7Q96M83 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC7.16□□□□□ -1.26
CCDC7Q96M83 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC7.16□□□□□ -1.26
CCDC7Q96M83 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC7.16□□□□□ -1.26
CCDC7Q96M83 AC087385.3-201ENST00000620477 187 ntBASIC7.16□□□□□ -1.26
CCDC7Q96M83 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC7.16□□□□□ -1.26
CCDC7Q96M83 AP000432.2-201ENST00000624164 2048 ntBASIC7.16□□□□□ -1.26
CCDC7Q96M83 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CCDC7Q96M83 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CCDC7Q96M83 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CCDC7Q96M83 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC7.15□□□□□ -1.26
CCDC7Q96M83 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CCDC7Q96M83 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CCDC7Q96M83 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC7.15□□□□□ -1.26
CCDC7Q96M83 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CCDC7Q96M83 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CCDC7Q96M83 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
CCDC7Q96M83 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
CCDC7Q96M83 AL078599.1-201ENST00000402075 293 ntBASIC7.15□□□□□ -1.26
CCDC7Q96M83 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC7.15□□□□□ -1.26
CCDC7Q96M83 AC006463.2-201ENST00000473326 348 ntBASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms