Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
PDLIM5Q96HC4 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 GSTA12P-201ENST00000402398 508 ntBASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 GABARAPL3-201ENST00000412799 354 ntBASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 HYALP1-201ENST00000417674 1279 ntBASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 PA2G4P6-201ENST00000438325 1197 ntBASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 AL035551.1-201ENST00000446931 348 ntBASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 AC073909.1-201ENST00000447112 999 ntBASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 RPL31P15-201ENST00000449770 338 ntBASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 AC079168.1-201ENST00000458741 345 ntBASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 CBX1P5-201ENST00000475330 559 ntBASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 AC022133.1-201ENST00000490961 571 ntBASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 EIF3LP3-201ENST00000495197 822 ntBASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 AC090638.1-201ENST00000498296 909 ntBASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 AC104997.1-201ENST00000519761 717 ntBASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 AC027369.5-201ENST00000533838 755 ntBASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 AC010245.2-201ENST00000606908 1167 ntBASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 AC020658.4-201ENST00000613987 684 ntBASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 MIR6778-201ENST00000617912 73 ntBASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 AC127024.6-201ENST00000621598 424 ntBASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 TCP11X1-202ENST00000622971 1372 ntBASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDLIM5Q96HC4 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 AL034374.1-201ENST00000406329 351 ntBASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 AL358178.1-201ENST00000407698 397 ntBASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 RN7SKP293-201ENST00000411389 296 ntBASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 GSTM5P1-201ENST00000434751 660 ntBASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 SCAND3P1-201ENST00000439854 1060 ntBASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 RPL36AP39-201ENST00000445859 318 ntBASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 EIF1P7-201ENST00000487533 337 ntBASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 ACTR6P1-201ENST00000514311 1104 ntBASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 EIF3KP3-201ENST00000514461 639 ntBASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 RN7SKP99-201ENST00000517028 307 ntBASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 AP004607.2-201ENST00000533949 322 ntBASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 NMNAT1P5-201ENST00000559657 841 ntBASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 MTCYBP13-201ENST00000578634 1093 ntBASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 AC124856.1-201ENST00000600819 896 ntBASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 AL137072.1-201ENST00000603444 466 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms