Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
CHD5Q8TDI0 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.21□□□□□ -1.57
CHD5Q8TDI0 AC007996.1-201ENST00000620414 2821 ntBASIC5.21□□□□□ -1.58
CHD5Q8TDI0 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CHD5Q8TDI0 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHD5Q8TDI0 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHD5Q8TDI0 RNU4-4P-201ENST00000364588 130 ntBASIC5.21□□□□□ -1.58
CHD5Q8TDI0 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.21□□□□□ -1.58
CHD5Q8TDI0 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.21□□□□□ -1.58
CHD5Q8TDI0 AC006455.6-201ENST00000426192 893 ntBASIC5.21□□□□□ -1.58
CHD5Q8TDI0 AC046176.1-201ENST00000435260 1170 ntBASIC5.21□□□□□ -1.58
CHD5Q8TDI0 PSMD10P3-201ENST00000437000 448 ntBASIC5.21□□□□□ -1.58
CHD5Q8TDI0 OTX2P1-201ENST00000450956 354 ntBASIC5.21□□□□□ -1.58
CHD5Q8TDI0 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.21□□□□□ -1.58
CHD5Q8TDI0 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.21□□□□□ -1.58
CHD5Q8TDI0 AC097486.1-201ENST00000515331 210 ntBASIC5.21□□□□□ -1.58
CHD5Q8TDI0 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.21□□□□□ -1.58
CHD5Q8TDI0 AC012400.1-201ENST00000518452 381 ntBASIC5.21□□□□□ -1.58
CHD5Q8TDI0 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
CHD5Q8TDI0 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.21□□□□□ -1.58
CHD5Q8TDI0 AC068993.1-201ENST00000546724 589 ntBASIC5.21□□□□□ -1.58
CHD5Q8TDI0 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.21□□□□□ -1.58
CHD5Q8TDI0 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.21□□□□□ -1.58
CHD5Q8TDI0 BNIP3P35-201ENST00000604530 490 ntBASIC5.21□□□□□ -1.58
CHD5Q8TDI0 AL162431.4-201ENST00000604674 411 ntBASIC5.21□□□□□ -1.58
CHD5Q8TDI0 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.21□□□□□ -1.58
CHD5Q8TDI0 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
CHD5Q8TDI0 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHD5Q8TDI0 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.21□□□□□ -1.58
CHD5Q8TDI0 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.21□□□□□ -1.58
CHD5Q8TDI0 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHD5Q8TDI0 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHD5Q8TDI0 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHD5Q8TDI0 SMG1P7-201ENST00000565246 2704 ntBASIC5.21□□□□□ -1.58
CHD5Q8TDI0 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CHD5Q8TDI0 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHD5Q8TDI0 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.21□□□□□ -1.58
CHD5Q8TDI0 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHD5Q8TDI0 ADAM5-202ENST00000399789 1942 ntBASIC5.2□□□□□ -1.58
CHD5Q8TDI0 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHD5Q8TDI0 AC063976.2-201ENST00000425667 3556 ntBASIC5.2□□□□□ -1.58
CHD5Q8TDI0 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CHD5Q8TDI0 RNA5SP428-201ENST00000365129 132 ntBASIC5.2□□□□□ -1.58
CHD5Q8TDI0 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.2□□□□□ -1.58
CHD5Q8TDI0 AL035079.1-201ENST00000405210 287 ntBASIC5.2□□□□□ -1.58
CHD5Q8TDI0 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.2□□□□□ -1.58
CHD5Q8TDI0 RN7SKP125-201ENST00000410481 302 ntBASIC5.2□□□□□ -1.58
CHD5Q8TDI0 GTF2IP5-201ENST00000414608 731 ntBASIC5.2□□□□□ -1.58
CHD5Q8TDI0 CEACAMP7-201ENST00000444105 496 ntBASIC5.2□□□□□ -1.58
CHD5Q8TDI0 AC090602.1-201ENST00000469695 252 ntBASIC5.2□□□□□ -1.58
CHD5Q8TDI0 AC008410.1-201ENST00000483777 339 ntBASIC5.2□□□□□ -1.58
CHD5Q8TDI0 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHD5Q8TDI0 AP000676.2-201ENST00000529711 301 ntBASIC5.2□□□□□ -1.58
CHD5Q8TDI0 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHD5Q8TDI0 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.2□□□□□ -1.58
CHD5Q8TDI0 AC044860.2-201ENST00000561005 179 ntBASIC5.2□□□□□ -1.58
CHD5Q8TDI0 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.2□□□□□ -1.58
CHD5Q8TDI0 AC091932.2-201ENST00000623014 291 ntBASIC5.2□□□□□ -1.58
CHD5Q8TDI0 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHD5Q8TDI0 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHD5Q8TDI0 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
CHD5Q8TDI0 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHD5Q8TDI0 THAP12P4-201ENST00000528321 2266 ntBASIC5.2□□□□□ -1.58
CHD5Q8TDI0 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
CHD5Q8TDI0 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHD5Q8TDI0 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CHD5Q8TDI0 AL450345.1-202ENST00000605741 3881 ntBASIC5.2□□□□□ -1.58
CHD5Q8TDI0 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CHD5Q8TDI0 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.2□□□□□ -1.58
CHD5Q8TDI0 AC007342.5-201ENST00000571340 2142 ntBASIC5.2□□□□□ -1.58
CHD5Q8TDI0 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.2□□□□□ -1.58
CHD5Q8TDI0 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.2□□□□□ -1.58
CHD5Q8TDI0 RNA5SP345-201ENST00000410646 108 ntBASIC5.2□□□□□ -1.58
CHD5Q8TDI0 RPL23AP27-201ENST00000415161 451 ntBASIC5.2□□□□□ -1.58
CHD5Q8TDI0 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.2□□□□□ -1.58
CHD5Q8TDI0 NPM1P22-201ENST00000427761 952 ntBASIC5.2□□□□□ -1.58
CHD5Q8TDI0 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC5.2□□□□□ -1.58
CHD5Q8TDI0 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.2□□□□□ -1.58
CHD5Q8TDI0 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.2□□□□□ -1.58
CHD5Q8TDI0 RPS4XP20-201ENST00000505751 772 ntBASIC5.2□□□□□ -1.58
CHD5Q8TDI0 GAPDHP56-201ENST00000506031 988 ntBASIC5.2□□□□□ -1.58
CHD5Q8TDI0 HNRNPRP2-201ENST00000528421 743 ntBASIC5.2□□□□□ -1.58
CHD5Q8TDI0 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.2□□□□□ -1.58
CHD5Q8TDI0 AC019206.1-201ENST00000621938 425 ntBASIC5.2□□□□□ -1.58
CHD5Q8TDI0 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHD5Q8TDI0 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CHD5Q8TDI0 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CHD5Q8TDI0 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.19□□□□□ -1.58
CHD5Q8TDI0 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CHD5Q8TDI0 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
CHD5Q8TDI0 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
CHD5Q8TDI0 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.19□□□□□ -1.58
CHD5Q8TDI0 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CHD5Q8TDI0 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHD5Q8TDI0 AC012078.1-201ENST00000405035 1646 ntBASIC5.19□□□□□ -1.58
CHD5Q8TDI0 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.19□□□□□ -1.58
CHD5Q8TDI0 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CHD5Q8TDI0 HMGB3P7-201ENST00000400214 611 ntBASIC5.19□□□□□ -1.58
CHD5Q8TDI0 RPS29P9-201ENST00000440360 171 ntBASIC5.19□□□□□ -1.58
CHD5Q8TDI0 AC079841.1-201ENST00000481228 950 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms