Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC007066.2-202ENST00000566531 914 ntBASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 AC022884.2-201ENST00000578535 580 ntBASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 MIR1273E-201ENST00000581165 102 ntBASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 RN7SL787P-201ENST00000613000 284 ntBASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 AC021242.1-201ENST00000507315 2035 ntBASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 AC023421.1-201ENST00000590535 1785 ntBASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 AC104260.2-201ENST00000623551 3497 ntBASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 RNA5SP319-201ENST00000362768 119 ntBASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 RN7SKP153-201ENST00000365026 316 ntBASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 RNU6-1263P-201ENST00000384601 106 ntBASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 MIR105-1-201ENST00000385222 81 ntBASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 HMGN1P36-201ENST00000446623 298 ntBASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 YWHAEP1-201ENST00000453697 763 ntBASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 AL049874.2-201ENST00000492636 288 ntBASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 RN7SL591P-201ENST00000496150 292 ntBASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 RPS24P16-201ENST00000497294 392 ntBASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 YWHABP2-201ENST00000540201 713 ntBASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 AC060766.1-201ENST00000590824 627 ntBASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 FO393422.1-201ENST00000603908 708 ntBASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 BNIP3P41-202ENST00000616656 861 ntBASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 MTCO1P1-201ENST00000624263 1081 ntBASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLHC1Q8NHS4 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 THAP12P8-201ENST00000447914 2115 ntBASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 RN7SKP224-201ENST00000364140 325 ntBASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 RNA5SP223-201ENST00000365174 120 ntBASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 RPL23AP19-201ENST00000436229 369 ntBASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 GAPDHP25-201ENST00000447061 1001 ntBASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 AC073909.1-201ENST00000447112 999 ntBASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 RPL35AP19-201ENST00000469425 329 ntBASIC5.03□□□□□ -1.6
CLHC1Q8NHS4 NPM1P29-201ENST00000483112 803 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms