Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC138409.2-202ENST00000507274 458 ntBASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 GTF2IP11-201ENST00000526931 420 ntBASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 AC126177.5-201ENST00000549599 178 ntBASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 AC063949.1-201ENST00000552900 865 ntBASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 AL121839.1-201ENST00000556233 1185 ntBASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 AC124283.4-201ENST00000581815 456 ntBASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 AC016717.3-201ENST00000624730 554 ntBASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 ZNF90P1-201ENST00000480493 1951 ntBASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.94□□□□□ -1.3
SMC1BQ8NDV3 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 AL161912.4-201ENST00000623889 2468 ntBASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 Z95114.1-201ENST00000624264 14574 ntBASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 AF228730.1-201ENST00000397972 663 ntBASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 AL390774.1-201ENST00000411924 246 ntBASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 AL713922.1-201ENST00000416477 747 ntBASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 TCEA1P2-201ENST00000420496 906 ntBASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 AC241520.1-201ENST00000422654 1099 ntBASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 AC092447.3-201ENST00000426027 686 ntBASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 AC104837.2-201ENST00000427236 424 ntBASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 AL450023.1-201ENST00000450868 751 ntBASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 ZNF736P8Y-201ENST00000451913 669 ntBASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 HMGB1P26-201ENST00000452520 628 ntBASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 RPS3AP41-201ENST00000462701 778 ntBASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 RPS17P11-201ENST00000474297 293 ntBASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 AC021146.5-201ENST00000503544 545 ntBASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 AC069306.1-201ENST00000507006 843 ntBASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 UBE2Q2P10-201ENST00000514854 900 ntBASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 TOMM20P2-201ENST00000540082 421 ntBASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 AGGF1P9-201ENST00000561884 913 ntBASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 MRPS21P7-201ENST00000566937 238 ntBASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 AL953862.2-201ENST00000603089 820 ntBASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 AC005034.4-201ENST00000603612 899 ntBASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 AC005084.1-201ENST00000605160 304 ntBASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 AC005899.7-201ENST00000618199 588 ntBASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 AL669942.2-201ENST00000620352 697 ntBASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 AL353662.3-201ENST00000625131 237 ntBASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 AC087516.1-201ENST00000561236 2428 ntBASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 SAMMSON-210ENST00000641260 1308 ntBASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
SMC1BQ8NDV3 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms