Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
COLGALT1Q8NBJ5 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
COLGALT1Q8NBJ5 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
COLGALT1Q8NBJ5 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
COLGALT1Q8NBJ5 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.67□□□□□ -1.5
COLGALT1Q8NBJ5 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.67□□□□□ -1.5
COLGALT1Q8NBJ5 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.67□□□□□ -1.5
COLGALT1Q8NBJ5 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.67□□□□□ -1.5
COLGALT1Q8NBJ5 AL031658.2-201ENST00000616850 651 ntBASIC5.67□□□□□ -1.5
COLGALT1Q8NBJ5 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.67□□□□□ -1.5
COLGALT1Q8NBJ5 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COLGALT1Q8NBJ5 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COLGALT1Q8NBJ5 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.67□□□□□ -1.5
COLGALT1Q8NBJ5 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COLGALT1Q8NBJ5 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
COLGALT1Q8NBJ5 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
COLGALT1Q8NBJ5 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COLGALT1Q8NBJ5 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
COLGALT1Q8NBJ5 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 U3.3-201ENST00000362986 216 ntBASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 SNORD56.6-201ENST00000384569 71 ntBASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 AL078599.1-201ENST00000402075 293 ntBASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 EI24P4-201ENST00000423683 1078 ntBASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 NFYAP1-201ENST00000431953 972 ntBASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 MORF4L1P4-201ENST00000450245 976 ntBASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 GYG1P1-201ENST00000460864 698 ntBASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 AP002371.1-201ENST00000463604 433 ntBASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 AC079064.1-201ENST00000528365 362 ntBASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 OR11H3P-201ENST00000554547 982 ntBASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 ELOCP28-201ENST00000590044 317 ntBASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 AC135068.5-201ENST00000624197 983 ntBASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 SAMMSON-210ENST00000641260 1308 ntBASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 AL359715.3-201ENST00000569267 2123 ntBASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 AC018628.1-201ENST00000624147 3819 ntBASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COLGALT1Q8NBJ5 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 AC012618.3-205ENST00000637896 1496 ntBASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 NUDT19P3-201ENST00000404698 555 ntBASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 HMGB1P32-201ENST00000425971 565 ntBASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 RPS27AP6-201ENST00000427962 448 ntBASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 RPL5P2-201ENST00000429598 854 ntBASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 CEACAMP9-201ENST00000442990 513 ntBASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 AC021106.1-201ENST00000509020 1058 ntBASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 AC012400.1-201ENST00000518452 381 ntBASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 MIR4330-201ENST00000579077 105 ntBASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 AC009237.13-201ENST00000603193 276 ntBASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 AC087385.3-201ENST00000620477 187 ntBASIC5.65□□□□□ -1.5
COLGALT1Q8NBJ5 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms