Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC71Q8IV32 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CCDC71Q8IV32 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC71Q8IV32 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC71Q8IV32 PABPC1P6-201ENST00000445594 1829 ntBASIC5.06□□□□□ -1.6
CCDC71Q8IV32 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC71Q8IV32 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC71Q8IV32 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC71Q8IV32 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
CCDC71Q8IV32 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC71Q8IV32 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC71Q8IV32 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC71Q8IV32 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 THAP12P8-201ENST00000447914 2115 ntBASIC5.05□□□□□ -1.6
CCDC71Q8IV32 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 RNA5SP30-201ENST00000365552 115 ntBASIC5.05□□□□□ -1.6
CCDC71Q8IV32 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 RPL12P9-201ENST00000412942 488 ntBASIC5.05□□□□□ -1.6
CCDC71Q8IV32 MTND4LP21-201ENST00000415303 295 ntBASIC5.05□□□□□ -1.6
CCDC71Q8IV32 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 HSPE1P16-201ENST00000426640 348 ntBASIC5.05□□□□□ -1.6
CCDC71Q8IV32 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 TCEA1P3-201ENST00000443005 880 ntBASIC5.05□□□□□ -1.6
CCDC71Q8IV32 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 IGBP1P3-201ENST00000447449 1000 ntBASIC5.05□□□□□ -1.6
CCDC71Q8IV32 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 AC021660.1-201ENST00000465006 554 ntBASIC5.05□□□□□ -1.6
CCDC71Q8IV32 RN7SL51P-201ENST00000468230 285 ntBASIC5.05□□□□□ -1.6
CCDC71Q8IV32 RPS3AP15-201ENST00000483874 781 ntBASIC5.05□□□□□ -1.6
CCDC71Q8IV32 AC004815.1-201ENST00000484185 331 ntBASIC5.05□□□□□ -1.6
CCDC71Q8IV32 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 AC006499.3-201ENST00000506077 748 ntBASIC5.05□□□□□ -1.6
CCDC71Q8IV32 HIGD1AP14-201ENST00000507617 282 ntBASIC5.05□□□□□ -1.6
CCDC71Q8IV32 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 IMPA1P1-201ENST00000510718 842 ntBASIC5.05□□□□□ -1.6
CCDC71Q8IV32 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 RNU6-943P-201ENST00000516960 98 ntBASIC5.05□□□□□ -1.6
CCDC71Q8IV32 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 NRBF2P4-201ENST00000520874 850 ntBASIC5.05□□□□□ -1.6
CCDC71Q8IV32 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 AL390334.1-201ENST00000556395 450 ntBASIC5.05□□□□□ -1.6
CCDC71Q8IV32 NMNAT1P5-201ENST00000559657 841 ntBASIC5.05□□□□□ -1.6
CCDC71Q8IV32 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 DPRXP4-201ENST00000578053 568 ntBASIC5.05□□□□□ -1.6
CCDC71Q8IV32 AP005262.1-201ENST00000582646 997 ntBASIC5.05□□□□□ -1.6
CCDC71Q8IV32 PRPF19P1-201ENST00000584766 898 ntBASIC5.05□□□□□ -1.6
CCDC71Q8IV32 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 MIR6837-201ENST00000620884 64 ntBASIC5.05□□□□□ -1.6
CCDC71Q8IV32 AC091932.2-201ENST00000623014 291 ntBASIC5.05□□□□□ -1.6
CCDC71Q8IV32 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 AC136428.4-201ENST00000634254 1155 ntBASIC5.05□□□□□ -1.6
CCDC71Q8IV32 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC71Q8IV32 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC71Q8IV32 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC71Q8IV32 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC71Q8IV32 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC71Q8IV32 RNA5SP234-201ENST00000363916 119 ntBASIC5.04□□□□□ -1.6
CCDC71Q8IV32 GABARAPL3-201ENST00000412799 354 ntBASIC5.04□□□□□ -1.6
CCDC71Q8IV32 RPS6P23-201ENST00000413224 722 ntBASIC5.04□□□□□ -1.6
CCDC71Q8IV32 RPL7L1P9-201ENST00000431298 745 ntBASIC5.04□□□□□ -1.6
CCDC71Q8IV32 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC71Q8IV32 AC097523.2-201ENST00000435551 652 ntBASIC5.04□□□□□ -1.6
CCDC71Q8IV32 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC71Q8IV32 RSL24D1P2-201ENST00000445584 366 ntBASIC5.04□□□□□ -1.6
CCDC71Q8IV32 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC71Q8IV32 PSAT1P4-201ENST00000466500 526 ntBASIC5.04□□□□□ -1.6
CCDC71Q8IV32 TRBV8-1-201ENST00000481590 279 ntBASIC5.04□□□□□ -1.6
CCDC71Q8IV32 EIF1P7-201ENST00000487533 337 ntBASIC5.04□□□□□ -1.6
CCDC71Q8IV32 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC71Q8IV32 AC090638.1-201ENST00000498296 909 ntBASIC5.04□□□□□ -1.6
CCDC71Q8IV32 AC098799.1-201ENST00000504752 800 ntBASIC5.04□□□□□ -1.6
CCDC71Q8IV32 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms