Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC012557.1-201ENST00000607115 611 ntBASIC6.23□□□□□ -1.41
ATG4DQ86TL0 AC008536.2-201ENST00000607284 349 ntBASIC6.23□□□□□ -1.41
ATG4DQ86TL0 AL365204.3-201ENST00000612448 685 ntBASIC6.23□□□□□ -1.41
ATG4DQ86TL0 AC073569.3-201ENST00000619055 682 ntBASIC6.23□□□□□ -1.41
ATG4DQ86TL0 AL354702.2-202ENST00000641481 890 ntBASIC6.23□□□□□ -1.41
ATG4DQ86TL0 AC099063.3-201ENST00000642066 185 ntBASIC6.23□□□□□ -1.41
ATG4DQ86TL0 AC083806.2-201ENST00000617795 2685 ntBASIC6.23□□□□□ -1.41
ATG4DQ86TL0 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 AL079343.1-201ENST00000572358 1771 ntBASIC6.23□□□□□ -1.41
ATG4DQ86TL0 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4DQ86TL0 MROH3P-201ENST00000435735 2676 ntBASIC6.22□□□□□ -1.41
ATG4DQ86TL0 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 BX284613.1-201ENST00000452221 1641 ntBASIC6.22□□□□□ -1.41
ATG4DQ86TL0 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 RNA5SP65-201ENST00000363166 119 ntBASIC6.22□□□□□ -1.41
ATG4DQ86TL0 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 Y_RNA.460-201ENST00000384255 102 ntBASIC6.22□□□□□ -1.41
ATG4DQ86TL0 EEF1GP6-201ENST00000402309 905 ntBASIC6.22□□□□□ -1.41
ATG4DQ86TL0 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 LINC00993-201ENST00000420453 540 ntBASIC6.22□□□□□ -1.41
ATG4DQ86TL0 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 CRYGGP-201ENST00000443337 145 ntBASIC6.22□□□□□ -1.41
ATG4DQ86TL0 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 AL050341.1-201ENST00000447743 313 ntBASIC6.22□□□□□ -1.41
ATG4DQ86TL0 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 DDX39BP2-208ENST00000453923 258 ntBASIC6.22□□□□□ -1.41
ATG4DQ86TL0 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 BZW1P1-201ENST00000454901 1240 ntBASIC6.22□□□□□ -1.41
ATG4DQ86TL0 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 WBP1LP4-201ENST00000505043 344 ntBASIC6.22□□□□□ -1.41
ATG4DQ86TL0 AC021678.1-201ENST00000505195 936 ntBASIC6.22□□□□□ -1.41
ATG4DQ86TL0 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 IGLC4-201ENST00000517690 248 ntBASIC6.22□□□□□ -1.41
ATG4DQ86TL0 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 MIR4428-201ENST00000584884 73 ntBASIC6.22□□□□□ -1.41
ATG4DQ86TL0 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 AC068726.1-201ENST00000610993 341 ntBASIC6.22□□□□□ -1.41
ATG4DQ86TL0 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.22□□□□□ -1.41
ATG4DQ86TL0 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.22□□□□□ -1.41
ATG4DQ86TL0 AL158209.2-201ENST00000619266 216 ntBASIC6.22□□□□□ -1.41
ATG4DQ86TL0 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 AC025287.2-201ENST00000621911 668 ntBASIC6.22□□□□□ -1.41
ATG4DQ86TL0 AC109454.4-201ENST00000623411 649 ntBASIC6.22□□□□□ -1.41
ATG4DQ86TL0 AC138305.3-201ENST00000624988 240 ntBASIC6.22□□□□□ -1.41
ATG4DQ86TL0 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 ZNF812P-201ENST00000457674 1694 ntBASIC6.22□□□□□ -1.41
ATG4DQ86TL0 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 AC096992.2-201ENST00000609553 1684 ntBASIC6.22□□□□□ -1.41
ATG4DQ86TL0 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.22□□□□□ -1.41
ATG4DQ86TL0 AC092111.2-201ENST00000611627 1414 ntBASIC6.22□□□□□ -1.41
ATG4DQ86TL0 AL031651.1-201ENST00000615357 1438 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms