Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 BX276092.6-201ENST00000430476 250 ntBASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 AL389925.1-201ENST00000432257 728 ntBASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 AC007563.3-201ENST00000433233 371 ntBASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 AC242426.1-201ENST00000435270 960 ntBASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 AL161636.2-201ENST00000445179 927 ntBASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 AL450996.1-201ENST00000445574 1202 ntBASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 RPL36AP39-201ENST00000445859 318 ntBASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 HMGN1P36-201ENST00000446623 298 ntBASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 BX276092.8-201ENST00000455722 250 ntBASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 RPS7P6-201ENST00000485777 579 ntBASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 RN7SL284P-201ENST00000498823 275 ntBASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 AC108157.1-201ENST00000510511 539 ntBASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 MTATP6P1-201ENST00000514057 681 ntBASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 GAPDHP62-201ENST00000515313 990 ntBASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 AC067904.2-201ENST00000517322 1283 ntBASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 MRPS16P1-201ENST00000523462 412 ntBASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 AC010547.6-201ENST00000571789 193 ntBASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 AC074276.2-201ENST00000619891 348 ntBASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 AC020923.1-201ENST00000624021 917 ntBASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
NUP54Q7Z3B4 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 AC007382.1-201ENST00000624376 2618 ntBASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 TMSB4XP4-201ENST00000323496 618 ntBASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 RNU4-39P-201ENST00000362455 127 ntBASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 RNA5SP453-201ENST00000362503 119 ntBASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 RNA5SP122-201ENST00000384457 108 ntBASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 AC087752.1-201ENST00000391360 558 ntBASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 AL512430.2-201ENST00000406786 339 ntBASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 BMS1P17-202ENST00000416720 316 ntBASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 MTND4LP14-201ENST00000429447 288 ntBASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 AL606490.7-201ENST00000433136 191 ntBASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 AC002504.1-201ENST00000438281 691 ntBASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 Z99127.2-201ENST00000441426 334 ntBASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 MTND5P8-201ENST00000449817 1083 ntBASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 RPS27AP2-201ENST00000457576 465 ntBASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 RPL5P22-201ENST00000480199 884 ntBASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 RPL7P51-201ENST00000490532 749 ntBASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 AC107918.3-201ENST00000533272 382 ntBASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 AC092868.3-201ENST00000560515 784 ntBASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.22□□□□□ -1.57
NUP54Q7Z3B4 AC123786.2-201ENST00000603459 275 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms