Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.02□□□□□ -1.61
RIF1Q5UIP0 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RIF1Q5UIP0 HSPD1P7-201ENST00000447985 1686 ntBASIC5.02□□□□□ -1.61
RIF1Q5UIP0 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RIF1Q5UIP0 RCC2P2-201ENST00000422174 918 ntBASIC5.02□□□□□ -1.61
RIF1Q5UIP0 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.02□□□□□ -1.61
RIF1Q5UIP0 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.02□□□□□ -1.61
RIF1Q5UIP0 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.02□□□□□ -1.61
RIF1Q5UIP0 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.02□□□□□ -1.61
RIF1Q5UIP0 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RIF1Q5UIP0 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RIF1Q5UIP0 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.02□□□□□ -1.61
RIF1Q5UIP0 AC011477.5-201ENST00000586571 259 ntBASIC5.02□□□□□ -1.61
RIF1Q5UIP0 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.02□□□□□ -1.61
RIF1Q5UIP0 AC008782.1-201ENST00000603386 430 ntBASIC5.02□□□□□ -1.61
RIF1Q5UIP0 AL161756.2-201ENST00000604597 246 ntBASIC5.02□□□□□ -1.61
RIF1Q5UIP0 AC004890.3-201ENST00000605566 1095 ntBASIC5.02□□□□□ -1.61
RIF1Q5UIP0 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.02□□□□□ -1.61
RIF1Q5UIP0 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RIF1Q5UIP0 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RIF1Q5UIP0 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC5.02□□□□□ -1.61
RIF1Q5UIP0 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
RIF1Q5UIP0 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.02□□□□□ -1.61
RIF1Q5UIP0 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RIF1Q5UIP0 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
RIF1Q5UIP0 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RIF1Q5UIP0 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.02□□□□□ -1.61
RIF1Q5UIP0 AC016027.5-201ENST00000427227 210 ntBASIC5.02□□□□□ -1.61
RIF1Q5UIP0 RPS29P9-201ENST00000440360 171 ntBASIC5.02□□□□□ -1.61
RIF1Q5UIP0 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.02□□□□□ -1.61
RIF1Q5UIP0 AL356390.1-201ENST00000455684 397 ntBASIC5.02□□□□□ -1.61
RIF1Q5UIP0 AC010326.1-201ENST00000462726 602 ntBASIC5.02□□□□□ -1.61
RIF1Q5UIP0 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.02□□□□□ -1.61
RIF1Q5UIP0 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.02□□□□□ -1.61
RIF1Q5UIP0 AC005191.1-201ENST00000603950 358 ntBASIC5.02□□□□□ -1.61
RIF1Q5UIP0 AC090948.1-201ENST00000607464 549 ntBASIC5.02□□□□□ -1.61
RIF1Q5UIP0 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.02□□□□□ -1.61
RIF1Q5UIP0 AP000843.1-201ENST00000624880 701 ntBASIC5.02□□□□□ -1.61
RIF1Q5UIP0 AC003973.3-201ENST00000624863 2822 ntBASIC5.02□□□□□ -1.61
RIF1Q5UIP0 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RIF1Q5UIP0 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
RIF1Q5UIP0 ZNF652P1-201ENST00000442420 1309 ntBASIC5.02□□□□□ -1.61
RIF1Q5UIP0 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
RIF1Q5UIP0 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RIF1Q5UIP0 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
RIF1Q5UIP0 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
RIF1Q5UIP0 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
RIF1Q5UIP0 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
RIF1Q5UIP0 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RIF1Q5UIP0 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.01□□□□□ -1.61
RIF1Q5UIP0 AC114774.1-201ENST00000507410 1770 ntBASIC5.01□□□□□ -1.61
RIF1Q5UIP0 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RIF1Q5UIP0 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RIF1Q5UIP0 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.01□□□□□ -1.61
RIF1Q5UIP0 RNA5SP317-201ENST00000410176 116 ntBASIC5.01□□□□□ -1.61
RIF1Q5UIP0 RNA5SP311-201ENST00000411290 116 ntBASIC5.01□□□□□ -1.61
RIF1Q5UIP0 RSU1P3-201ENST00000412878 835 ntBASIC5.01□□□□□ -1.61
RIF1Q5UIP0 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.01□□□□□ -1.61
RIF1Q5UIP0 OR4C10P-201ENST00000434991 931 ntBASIC5.01□□□□□ -1.61
RIF1Q5UIP0 CBX1P1-201ENST00000440184 427 ntBASIC5.01□□□□□ -1.61
RIF1Q5UIP0 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.01□□□□□ -1.61
RIF1Q5UIP0 RNA5SP315-201ENST00000516340 116 ntBASIC5.01□□□□□ -1.61
RIF1Q5UIP0 RNA5SP312-201ENST00000517068 116 ntBASIC5.01□□□□□ -1.61
RIF1Q5UIP0 MIR3158-1-201ENST00000583596 81 ntBASIC5.01□□□□□ -1.61
RIF1Q5UIP0 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
RIF1Q5UIP0 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.01□□□□□ -1.61
RIF1Q5UIP0 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.01□□□□□ -1.61
RIF1Q5UIP0 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RIF1Q5UIP0 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.01□□□□□ -1.61
RIF1Q5UIP0 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RIF1Q5UIP0 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RIF1Q5UIP0 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.01□□□□□ -1.61
RIF1Q5UIP0 AC120338.1-201ENST00000625074 1541 ntBASIC5.01□□□□□ -1.61
RIF1Q5UIP0 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RIF1Q5UIP0 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RIF1Q5UIP0 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RIF1Q5UIP0 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RIF1Q5UIP0 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.01□□□□□ -1.61
RIF1Q5UIP0 AL358176.3-201ENST00000420757 454 ntBASIC5.01□□□□□ -1.61
RIF1Q5UIP0 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.01□□□□□ -1.61
RIF1Q5UIP0 AL358232.1-201ENST00000448030 501 ntBASIC5.01□□□□□ -1.61
RIF1Q5UIP0 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.01□□□□□ -1.61
RIF1Q5UIP0 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RIF1Q5UIP0 RPL23AP24-201ENST00000458203 385 ntBASIC5.01□□□□□ -1.61
RIF1Q5UIP0 NIFKP7-201ENST00000503365 834 ntBASIC5.01□□□□□ -1.61
RIF1Q5UIP0 AC006427.1-201ENST00000514359 712 ntBASIC5.01□□□□□ -1.61
RIF1Q5UIP0 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.01□□□□□ -1.61
RIF1Q5UIP0 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.01□□□□□ -1.61
RIF1Q5UIP0 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.01□□□□□ -1.61
RIF1Q5UIP0 AC005858.4-201ENST00000623191 700 ntBASIC5.01□□□□□ -1.61
RIF1Q5UIP0 AC002044.3-201ENST00000623314 541 ntBASIC5.01□□□□□ -1.61
RIF1Q5UIP0 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.01□□□□□ -1.61
RIF1Q5UIP0 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RIF1Q5UIP0 AC010928.1-201ENST00000592477 1447 ntBASIC5.01□□□□□ -1.61
RIF1Q5UIP0 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5□□□□□ -1.61
RIF1Q5UIP0 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC5□□□□□ -1.61
RIF1Q5UIP0 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
RIF1Q5UIP0 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5□□□□□ -1.61
RIF1Q5UIP0 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5□□□□□ -1.61
RIF1Q5UIP0 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms