Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LRRK2Q5S007 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LRRK2Q5S007 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LRRK2Q5S007 AC093908.1-201ENST00000623125 8092 ntBASIC4.49□□□□□ -1.69
LRRK2Q5S007 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LRRK2Q5S007 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC4.49□□□□□ -1.69
LRRK2Q5S007 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LRRK2Q5S007 U3.10-201ENST00000364459 214 ntBASIC4.49□□□□□ -1.69
LRRK2Q5S007 MIR105-1-201ENST00000385222 81 ntBASIC4.49□□□□□ -1.69
LRRK2Q5S007 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.49□□□□□ -1.69
LRRK2Q5S007 RPL36AP15-201ENST00000444514 266 ntBASIC4.49□□□□□ -1.69
LRRK2Q5S007 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.49□□□□□ -1.69
LRRK2Q5S007 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC4.49□□□□□ -1.69
LRRK2Q5S007 NMNAT1P1-201ENST00000554095 876 ntBASIC4.49□□□□□ -1.69
LRRK2Q5S007 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.49□□□□□ -1.69
LRRK2Q5S007 AC099676.1-201ENST00000608886 657 ntBASIC4.49□□□□□ -1.69
LRRK2Q5S007 AL121873.1-201ENST00000616013 524 ntBASIC4.49□□□□□ -1.69
LRRK2Q5S007 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LRRK2Q5S007 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC4.49□□□□□ -1.69
LRRK2Q5S007 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC4.49□□□□□ -1.69
LRRK2Q5S007 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
LRRK2Q5S007 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LRRK2Q5S007 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.49□□□□□ -1.69
LRRK2Q5S007 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC4.49□□□□□ -1.69
LRRK2Q5S007 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LRRK2Q5S007 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LRRK2Q5S007 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LRRK2Q5S007 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LRRK2Q5S007 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LRRK2Q5S007 AL590240.1-201ENST00000334118 313 ntBASIC4.48□□□□□ -1.69
LRRK2Q5S007 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
LRRK2Q5S007 RNU6-761P-201ENST00000384148 107 ntBASIC4.48□□□□□ -1.69
LRRK2Q5S007 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.48□□□□□ -1.69
LRRK2Q5S007 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.48□□□□□ -1.69
LRRK2Q5S007 YWHABP1-201ENST00000445359 727 ntBASIC4.48□□□□□ -1.69
LRRK2Q5S007 AC079168.1-201ENST00000458741 345 ntBASIC4.48□□□□□ -1.69
LRRK2Q5S007 RN7SL319P-201ENST00000480656 221 ntBASIC4.48□□□□□ -1.69
LRRK2Q5S007 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LRRK2Q5S007 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC4.48□□□□□ -1.69
LRRK2Q5S007 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.48□□□□□ -1.69
LRRK2Q5S007 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.48□□□□□ -1.69
LRRK2Q5S007 MIR6075-201ENST00000620782 95 ntBASIC4.48□□□□□ -1.69
LRRK2Q5S007 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
LRRK2Q5S007 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LRRK2Q5S007 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LRRK2Q5S007 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LRRK2Q5S007 AC112243.1-201ENST00000623949 3851 ntBASIC4.48□□□□□ -1.69
LRRK2Q5S007 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LRRK2Q5S007 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
LRRK2Q5S007 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LRRK2Q5S007 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LRRK2Q5S007 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LRRK2Q5S007 U3.3-201ENST00000362986 216 ntBASIC4.48□□□□□ -1.69
LRRK2Q5S007 RNA5SP317-201ENST00000410176 116 ntBASIC4.48□□□□□ -1.69
LRRK2Q5S007 RNA5SP311-201ENST00000411290 116 ntBASIC4.48□□□□□ -1.69
LRRK2Q5S007 RSU1P3-201ENST00000412878 835 ntBASIC4.48□□□□□ -1.69
LRRK2Q5S007 AL732292.1-201ENST00000426692 226 ntBASIC4.48□□□□□ -1.69
LRRK2Q5S007 OR4C10P-201ENST00000434991 931 ntBASIC4.48□□□□□ -1.69
LRRK2Q5S007 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.48□□□□□ -1.69
LRRK2Q5S007 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.48□□□□□ -1.69
LRRK2Q5S007 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.48□□□□□ -1.69
LRRK2Q5S007 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC4.48□□□□□ -1.69
LRRK2Q5S007 RNA5SP315-201ENST00000516340 116 ntBASIC4.48□□□□□ -1.69
LRRK2Q5S007 RNA5SP312-201ENST00000517068 116 ntBASIC4.48□□□□□ -1.69
LRRK2Q5S007 AC068831.4-201ENST00000556118 109 ntBASIC4.48□□□□□ -1.69
LRRK2Q5S007 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.48□□□□□ -1.69
LRRK2Q5S007 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.48□□□□□ -1.69
LRRK2Q5S007 AP005432.2-201ENST00000608162 586 ntBASIC4.48□□□□□ -1.69
LRRK2Q5S007 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.48□□□□□ -1.69
LRRK2Q5S007 AC006133.1-201ENST00000617106 264 ntBASIC4.48□□□□□ -1.69
LRRK2Q5S007 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.48□□□□□ -1.69
LRRK2Q5S007 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC4.48□□□□□ -1.69
LRRK2Q5S007 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LRRK2Q5S007 AL353763.1-201ENST00000624467 1628 ntBASIC4.48□□□□□ -1.69
LRRK2Q5S007 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.48□□□□□ -1.69
LRRK2Q5S007 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC4.48□□□□□ -1.69
LRRK2Q5S007 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LRRK2Q5S007 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
LRRK2Q5S007 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
LRRK2Q5S007 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC4.48□□□□□ -1.69
LRRK2Q5S007 AC009962.1-201ENST00000567327 3813 ntBASIC4.48□□□□□ -1.69
LRRK2Q5S007 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LRRK2Q5S007 NSF-206ENST00000575068 2667 ntTSL 2 BASIC4.47□□□□□ -1.69
LRRK2Q5S007 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LRRK2Q5S007 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LRRK2Q5S007 MSL3P1-202ENST00000440028 1468 ntBASIC4.47□□□□□ -1.69
LRRK2Q5S007 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.47□□□□□ -1.69
LRRK2Q5S007 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.47□□□□□ -1.69
LRRK2Q5S007 RNU6-525P-201ENST00000363685 104 ntBASIC4.47□□□□□ -1.69
LRRK2Q5S007 CEACAMP8-201ENST00000413902 580 ntBASIC4.47□□□□□ -1.69
LRRK2Q5S007 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LRRK2Q5S007 AC007562.1-201ENST00000421819 517 ntBASIC4.47□□□□□ -1.69
LRRK2Q5S007 RPEP3-201ENST00000425462 676 ntBASIC4.47□□□□□ -1.69
LRRK2Q5S007 TXNP5-201ENST00000441043 315 ntBASIC4.47□□□□□ -1.69
LRRK2Q5S007 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.47□□□□□ -1.69
LRRK2Q5S007 AC023274.2-201ENST00000445264 521 ntBASIC4.47□□□□□ -1.69
LRRK2Q5S007 ARL2BPP10-201ENST00000446487 531 ntBASIC4.47□□□□□ -1.69
LRRK2Q5S007 PRSS3P4-201ENST00000453323 162 ntBASIC4.47□□□□□ -1.69
LRRK2Q5S007 NIFKP7-201ENST00000503365 834 ntBASIC4.47□□□□□ -1.69
LRRK2Q5S007 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms