Protein–RNA interactions for Protein: Q06547

GABPB1, GA-binding protein subunit beta-1, humanhuman

Predicted RBP Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1Q06547 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
GABPB1Q06547 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.34□□□□□ -1.55
GABPB1Q06547 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
GABPB1Q06547 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
GABPB1Q06547 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
GABPB1Q06547 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.56
GABPB1Q06547 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
GABPB1Q06547 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.56
GABPB1Q06547 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.33□□□□□ -1.56
GABPB1Q06547 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
GABPB1Q06547 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
GABPB1Q06547 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.33□□□□□ -1.56
GABPB1Q06547 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
GABPB1Q06547 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
GABPB1Q06547 AL672167.1-203ENST00000641299 2975 ntBASIC5.33□□□□□ -1.56
GABPB1Q06547 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
GABPB1Q06547 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GABPB1Q06547 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
GABPB1Q06547 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
GABPB1Q06547 SNORA21-201ENST00000362423 132 ntBASIC5.33□□□□□ -1.56
GABPB1Q06547 RNU6-697P-201ENST00000363348 107 ntBASIC5.33□□□□□ -1.56
GABPB1Q06547 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.33□□□□□ -1.56
GABPB1Q06547 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
GABPB1Q06547 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.33□□□□□ -1.56
GABPB1Q06547 AC013470.3-201ENST00000420252 1194 ntBASIC5.33□□□□□ -1.56
GABPB1Q06547 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.33□□□□□ -1.56
GABPB1Q06547 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.33□□□□□ -1.56
GABPB1Q06547 AL139148.1-201ENST00000427122 680 ntBASIC5.33□□□□□ -1.56
GABPB1Q06547 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.33□□□□□ -1.56
GABPB1Q06547 FCF1P7-201ENST00000451185 558 ntBASIC5.33□□□□□ -1.56
GABPB1Q06547 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.33□□□□□ -1.56
GABPB1Q06547 RN7SL41P-201ENST00000476144 297 ntBASIC5.33□□□□□ -1.56
GABPB1Q06547 AC093270.2-201ENST00000486157 792 ntBASIC5.33□□□□□ -1.56
GABPB1Q06547 AC005412.2-201ENST00000492004 341 ntBASIC5.33□□□□□ -1.56
GABPB1Q06547 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.33□□□□□ -1.56
GABPB1Q06547 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.33□□□□□ -1.56
GABPB1Q06547 AC109464.1-201ENST00000511091 819 ntBASIC5.33□□□□□ -1.56
GABPB1Q06547 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5.33□□□□□ -1.56
GABPB1Q06547 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.33□□□□□ -1.56
GABPB1Q06547 RNA5SP154-201ENST00000516193 111 ntBASIC5.33□□□□□ -1.56
GABPB1Q06547 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.33□□□□□ -1.56
GABPB1Q06547 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.33□□□□□ -1.56
GABPB1Q06547 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.33□□□□□ -1.56
GABPB1Q06547 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.33□□□□□ -1.56
GABPB1Q06547 AC243960.7-201ENST00000623532 707 ntBASIC5.33□□□□□ -1.56
GABPB1Q06547 MBD5-221ENST00000637159 902 ntTSL 5 BASIC5.33□□□□□ -1.56
GABPB1Q06547 AC087190.4-201ENST00000574616 8334 ntBASIC5.33□□□□□ -1.56
GABPB1Q06547 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
GABPB1Q06547 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GABPB1Q06547 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.33□□□□□ -1.56
GABPB1Q06547 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
GABPB1Q06547 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GABPB1Q06547 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
GABPB1Q06547 CASC19-246ENST00000641625 1606 ntBASIC5.33□□□□□ -1.56
GABPB1Q06547 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.33□□□□□ -1.56
GABPB1Q06547 ECM1P2-201ENST00000503354 1577 ntBASIC5.33□□□□□ -1.56
GABPB1Q06547 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
GABPB1Q06547 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GABPB1Q06547 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
GABPB1Q06547 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
GABPB1Q06547 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.32□□□□□ -1.56
GABPB1Q06547 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
GABPB1Q06547 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
GABPB1Q06547 HSPA8P17-201ENST00000427029 1382 ntBASIC5.32□□□□□ -1.56
GABPB1Q06547 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
GABPB1Q06547 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.32□□□□□ -1.56
GABPB1Q06547 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
GABPB1Q06547 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
GABPB1Q06547 RNA5SP30-201ENST00000365552 115 ntBASIC5.32□□□□□ -1.56
GABPB1Q06547 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.32□□□□□ -1.56
GABPB1Q06547 OR13C3-201ENST00000374781 1108 ntBASIC5.32□□□□□ -1.56
GABPB1Q06547 AC104297.1-201ENST00000393779 870 ntBASIC5.32□□□□□ -1.56
GABPB1Q06547 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
GABPB1Q06547 RAB5CP1-201ENST00000395972 580 ntBASIC5.32□□□□□ -1.56
GABPB1Q06547 AL645733.1-201ENST00000402250 217 ntBASIC5.32□□□□□ -1.56
GABPB1Q06547 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.32□□□□□ -1.56
GABPB1Q06547 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.32□□□□□ -1.56
GABPB1Q06547 PTPN2P1-201ENST00000423212 1072 ntBASIC5.32□□□□□ -1.56
GABPB1Q06547 EIF4HP2-201ENST00000424380 563 ntBASIC5.32□□□□□ -1.56
GABPB1Q06547 OSTCP4-201ENST00000424397 449 ntBASIC5.32□□□□□ -1.56
GABPB1Q06547 MTCO1P51-201ENST00000427672 1060 ntBASIC5.32□□□□□ -1.56
GABPB1Q06547 PPIAP13-201ENST00000434706 478 ntBASIC5.32□□□□□ -1.56
GABPB1Q06547 AC093414.1-201ENST00000434712 514 ntBASIC5.32□□□□□ -1.56
GABPB1Q06547 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.32□□□□□ -1.56
GABPB1Q06547 AC063955.1-201ENST00000462872 685 ntBASIC5.32□□□□□ -1.56
GABPB1Q06547 RN7SL269P-201ENST00000467795 305 ntBASIC5.32□□□□□ -1.56
GABPB1Q06547 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.32□□□□□ -1.56
GABPB1Q06547 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
GABPB1Q06547 RPS6P4-201ENST00000494693 758 ntBASIC5.32□□□□□ -1.56
GABPB1Q06547 RPS4XP18-201ENST00000495480 763 ntBASIC5.32□□□□□ -1.56
GABPB1Q06547 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
GABPB1Q06547 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
GABPB1Q06547 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.32□□□□□ -1.56
GABPB1Q06547 CR383658.1-201ENST00000514609 734 ntBASIC5.32□□□□□ -1.56
GABPB1Q06547 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.32□□□□□ -1.56
GABPB1Q06547 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.32□□□□□ -1.56
GABPB1Q06547 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.32□□□□□ -1.56
GABPB1Q06547 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
GABPB1Q06547 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.32□□□□□ -1.56
GABPB1Q06547 HSPE1P2-201ENST00000554777 306 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms