Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 VBP1-203ENST00000535916 944 ntTSL 2 BASIC5.43□□□□□ -1.54
RAE1P78406 HSPE1P2-201ENST00000554777 306 ntBASIC5.43□□□□□ -1.54
RAE1P78406 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.43□□□□□ -1.54
RAE1P78406 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.43□□□□□ -1.54
RAE1P78406 AC090888.2-201ENST00000559765 1144 ntBASIC5.43□□□□□ -1.54
RAE1P78406 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC5.43□□□□□ -1.54
RAE1P78406 AGGF1P7-201ENST00000562369 913 ntBASIC5.43□□□□□ -1.54
RAE1P78406 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.43□□□□□ -1.54
RAE1P78406 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
RAE1P78406 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.43□□□□□ -1.54
RAE1P78406 AC073387.2-201ENST00000604797 784 ntBASIC5.43□□□□□ -1.54
RAE1P78406 Z99289.3-201ENST00000605586 594 ntBASIC5.43□□□□□ -1.54
RAE1P78406 AL031601.1-201ENST00000605702 394 ntBASIC5.43□□□□□ -1.54
RAE1P78406 AL035461.2-201ENST00000619201 524 ntBASIC5.43□□□□□ -1.54
RAE1P78406 AC022079.2-201ENST00000619739 566 ntBASIC5.43□□□□□ -1.54
RAE1P78406 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.43□□□□□ -1.54
RAE1P78406 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.43□□□□□ -1.54
RAE1P78406 AC093297.3-201ENST00000607056 2517 ntBASIC5.43□□□□□ -1.54
RAE1P78406 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RAE1P78406 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.43□□□□□ -1.54
RAE1P78406 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RAE1P78406 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.43□□□□□ -1.54
RAE1P78406 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
RAE1P78406 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RAE1P78406 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
RAE1P78406 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RAE1P78406 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.42□□□□□ -1.54
RAE1P78406 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.42□□□□□ -1.54
RAE1P78406 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RAE1P78406 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RAE1P78406 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
RAE1P78406 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.42□□□□□ -1.54
RAE1P78406 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RAE1P78406 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
RAE1P78406 AC007842.1-201ENST00000597336 2039 ntBASIC5.42□□□□□ -1.54
RAE1P78406 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
RAE1P78406 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
RAE1P78406 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
RAE1P78406 RNA5SP453-201ENST00000362503 119 ntBASIC5.42□□□□□ -1.54
RAE1P78406 RN7SKP185-201ENST00000362813 326 ntBASIC5.42□□□□□ -1.54
RAE1P78406 SUGT1P2-201ENST00000379452 992 ntBASIC5.42□□□□□ -1.54
RAE1P78406 RNU11-201ENST00000387069 134 ntBASIC5.42□□□□□ -1.54
RAE1P78406 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RAE1P78406 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.42□□□□□ -1.54
RAE1P78406 MTND2P16-201ENST00000419987 799 ntBASIC5.42□□□□□ -1.54
RAE1P78406 AC066692.1-201ENST00000421721 457 ntBASIC5.42□□□□□ -1.54
RAE1P78406 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.42□□□□□ -1.54
RAE1P78406 OR10T1P-201ENST00000424327 947 ntBASIC5.42□□□□□ -1.54
RAE1P78406 OSTCP5-201ENST00000425293 453 ntBASIC5.42□□□□□ -1.54
RAE1P78406 BX276092.6-201ENST00000430476 250 ntBASIC5.42□□□□□ -1.54
RAE1P78406 AC005189.1-201ENST00000431286 310 ntBASIC5.42□□□□□ -1.54
RAE1P78406 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RAE1P78406 AC000041.1-201ENST00000439655 175 ntBASIC5.42□□□□□ -1.54
RAE1P78406 MTCYBP12-201ENST00000440559 1134 ntBASIC5.42□□□□□ -1.54
RAE1P78406 Z95152.1-201ENST00000453556 656 ntBASIC5.42□□□□□ -1.54
RAE1P78406 BX276092.8-201ENST00000455722 250 ntBASIC5.42□□□□□ -1.54
RAE1P78406 OR11I1P-201ENST00000486033 954 ntBASIC5.42□□□□□ -1.54
RAE1P78406 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.42□□□□□ -1.54
RAE1P78406 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
RAE1P78406 BTG4P1-201ENST00000510421 183 ntBASIC5.42□□□□□ -1.54
RAE1P78406 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.42□□□□□ -1.54
RAE1P78406 SCARNA6.1-201ENST00000516989 238 ntBASIC5.42□□□□□ -1.54
RAE1P78406 IGLV3-24-201ENST00000517477 197 ntBASIC5.42□□□□□ -1.54
RAE1P78406 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.42□□□□□ -1.54
RAE1P78406 AC013701.1-201ENST00000522657 465 ntBASIC5.42□□□□□ -1.54
RAE1P78406 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.42□□□□□ -1.54
RAE1P78406 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.42□□□□□ -1.54
RAE1P78406 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.42□□□□□ -1.54
RAE1P78406 AC023538.1-201ENST00000534576 736 ntBASIC5.42□□□□□ -1.54
RAE1P78406 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.42□□□□□ -1.54
RAE1P78406 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.42□□□□□ -1.54
RAE1P78406 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RAE1P78406 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.42□□□□□ -1.54
RAE1P78406 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.42□□□□□ -1.54
RAE1P78406 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.42□□□□□ -1.54
RAE1P78406 MTND3P12-201ENST00000559068 328 ntBASIC5.42□□□□□ -1.54
RAE1P78406 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.42□□□□□ -1.54
RAE1P78406 MIR4260-201ENST00000583107 67 ntBASIC5.42□□□□□ -1.54
RAE1P78406 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.42□□□□□ -1.54
RAE1P78406 VN1R87P-201ENST00000596706 487 ntBASIC5.42□□□□□ -1.54
RAE1P78406 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.42□□□□□ -1.54
RAE1P78406 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.42□□□□□ -1.54
RAE1P78406 AL360012.1-201ENST00000602813 131 ntBASIC5.42□□□□□ -1.54
RAE1P78406 ELOCP35-201ENST00000604289 336 ntBASIC5.42□□□□□ -1.54
RAE1P78406 FAM27E4-201ENST00000605259 342 ntBASIC5.42□□□□□ -1.54
RAE1P78406 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.42□□□□□ -1.54
RAE1P78406 AC005618.4-201ENST00000625053 554 ntBASIC5.42□□□□□ -1.54
RAE1P78406 MTND5P23-201ENST00000430812 1655 ntBASIC5.42□□□□□ -1.54
RAE1P78406 AL132640.2-201ENST00000559968 1698 ntBASIC5.42□□□□□ -1.54
RAE1P78406 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.42□□□□□ -1.54
RAE1P78406 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RAE1P78406 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RAE1P78406 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RAE1P78406 SSXP3-201ENST00000442971 1300 ntBASIC5.42□□□□□ -1.54
RAE1P78406 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
RAE1P78406 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RAE1P78406 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.41□□□□□ -1.54
RAE1P78406 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
RAE1P78406 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.41□□□□□ -1.54
RAE1P78406 AC083899.1-201ENST00000454465 3819 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms