Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 DUTP5-201ENST00000406790 469 ntBASIC4.93□□□□□ -1.62
LIM2P55344 CASKP1-201ENST00000412870 582 ntBASIC4.93□□□□□ -1.62
LIM2P55344 AL355433.1-201ENST00000422804 300 ntBASIC4.93□□□□□ -1.62
LIM2P55344 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LIM2P55344 EI24P4-201ENST00000423683 1078 ntBASIC4.93□□□□□ -1.62
LIM2P55344 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.93□□□□□ -1.62
LIM2P55344 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.93□□□□□ -1.62
LIM2P55344 TPTE2P1-204ENST00000435256 593 ntBASIC4.93□□□□□ -1.62
LIM2P55344 GAPDHP58-201ENST00000438477 1006 ntBASIC4.93□□□□□ -1.62
LIM2P55344 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.93□□□□□ -1.62
LIM2P55344 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.93□□□□□ -1.62
LIM2P55344 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.93□□□□□ -1.62
LIM2P55344 AC245028.2-201ENST00000458673 253 ntBASIC4.93□□□□□ -1.62
LIM2P55344 AC072052.1-201ENST00000496556 306 ntBASIC4.93□□□□□ -1.62
LIM2P55344 ENPP7P11-201ENST00000505915 627 ntBASIC4.93□□□□□ -1.62
LIM2P55344 GOLGA5P1-201ENST00000507317 980 ntBASIC4.93□□□□□ -1.62
LIM2P55344 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LIM2P55344 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.93□□□□□ -1.62
LIM2P55344 AC024940.3-201ENST00000538551 316 ntBASIC4.93□□□□□ -1.62
LIM2P55344 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.93□□□□□ -1.62
LIM2P55344 AC084033.1-201ENST00000550830 633 ntBASIC4.93□□□□□ -1.62
LIM2P55344 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
LIM2P55344 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
LIM2P55344 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
LIM2P55344 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
LIM2P55344 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.93□□□□□ -1.62
LIM2P55344 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.93□□□□□ -1.62
LIM2P55344 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LIM2P55344 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LIM2P55344 AC127024.5-201ENST00000580085 462 ntBASIC4.93□□□□□ -1.62
LIM2P55344 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
LIM2P55344 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.93□□□□□ -1.62
LIM2P55344 AC095055.1-201ENST00000603472 1113 ntBASIC4.93□□□□□ -1.62
LIM2P55344 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.93□□□□□ -1.62
LIM2P55344 AC126915.2-201ENST00000610957 190 ntBASIC4.93□□□□□ -1.62
LIM2P55344 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.93□□□□□ -1.62
LIM2P55344 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.93□□□□□ -1.62
LIM2P55344 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.93□□□□□ -1.62
LIM2P55344 AC135068.12-201ENST00000637370 931 ntBASIC4.93□□□□□ -1.62
LIM2P55344 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LIM2P55344 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LIM2P55344 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.93□□□□□ -1.62
LIM2P55344 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LIM2P55344 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
LIM2P55344 SMG1P7-201ENST00000565246 2704 ntBASIC4.93□□□□□ -1.62
LIM2P55344 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
LIM2P55344 CIR1P2-201ENST00000514821 1342 ntBASIC4.93□□□□□ -1.62
LIM2P55344 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
LIM2P55344 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
LIM2P55344 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
LIM2P55344 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
LIM2P55344 CUL4AP1-201ENST00000514750 1863 ntBASIC4.92□□□□□ -1.62
LIM2P55344 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LIM2P55344 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LIM2P55344 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
LIM2P55344 AL450345.1-202ENST00000605741 3881 ntBASIC4.92□□□□□ -1.62
LIM2P55344 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LIM2P55344 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LIM2P55344 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
LIM2P55344 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LIM2P55344 MIR600-201ENST00000385007 98 ntBASIC4.92□□□□□ -1.62
LIM2P55344 MIR223-201ENST00000385204 110 ntBASIC4.92□□□□□ -1.62
LIM2P55344 RPL21P67-201ENST00000402896 478 ntBASIC4.92□□□□□ -1.62
LIM2P55344 NUDT19P3-201ENST00000404698 555 ntBASIC4.92□□□□□ -1.62
LIM2P55344 MIR1182-201ENST00000408363 97 ntBASIC4.92□□□□□ -1.62
LIM2P55344 GTF3AP1-201ENST00000416942 1004 ntBASIC4.92□□□□□ -1.62
LIM2P55344 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.92□□□□□ -1.62
LIM2P55344 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.92□□□□□ -1.62
LIM2P55344 AL691447.1-201ENST00000419456 387 ntBASIC4.92□□□□□ -1.62
LIM2P55344 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.92□□□□□ -1.62
LIM2P55344 RPS4XP16-201ENST00000427198 791 ntBASIC4.92□□□□□ -1.62
LIM2P55344 FAR2P1-206ENST00000449736 709 ntBASIC4.92□□□□□ -1.62
LIM2P55344 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.92□□□□□ -1.62
LIM2P55344 AC009127.1-201ENST00000467090 155 ntBASIC4.92□□□□□ -1.62
LIM2P55344 AC079841.1-201ENST00000481228 950 ntBASIC4.92□□□□□ -1.62
LIM2P55344 NPM1P21-201ENST00000513394 762 ntBASIC4.92□□□□□ -1.62
LIM2P55344 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.92□□□□□ -1.62
LIM2P55344 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.92□□□□□ -1.62
LIM2P55344 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.92□□□□□ -1.62
LIM2P55344 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.92□□□□□ -1.62
LIM2P55344 AC022884.2-201ENST00000578535 580 ntBASIC4.92□□□□□ -1.62
LIM2P55344 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.92□□□□□ -1.62
LIM2P55344 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.92□□□□□ -1.62
LIM2P55344 AP005131.7-201ENST00000610087 611 ntBASIC4.92□□□□□ -1.62
LIM2P55344 AC118658.2-201ENST00000618697 459 ntBASIC4.92□□□□□ -1.62
LIM2P55344 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.92□□□□□ -1.62
LIM2P55344 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.92□□□□□ -1.62
LIM2P55344 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LIM2P55344 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LIM2P55344 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
LIM2P55344 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
LIM2P55344 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LIM2P55344 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.92□□□□□ -1.62
LIM2P55344 AC022417.1-201ENST00000624768 1303 ntBASIC4.92□□□□□ -1.62
LIM2P55344 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LIM2P55344 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LIM2P55344 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.91□□□□□ -1.62
LIM2P55344 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LIM2P55344 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LIM2P55344 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms