Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 MIMT1-201ENST00000597105 1050 ntBASIC5.05□□□□□ -1.6
CDH11P55287 HMGB1P51-201ENST00000605166 638 ntBASIC5.05□□□□□ -1.6
CDH11P55287 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDH11P55287 MIR6886-201ENST00000619864 61 ntBASIC5.05□□□□□ -1.6
CDH11P55287 AP001002.1-201ENST00000625148 1513 ntBASIC5.05□□□□□ -1.6
CDH11P55287 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDH11P55287 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.05□□□□□ -1.6
CDH11P55287 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
CDH11P55287 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CDH11P55287 AC116158.1-201ENST00000560231 2129 ntBASIC5.05□□□□□ -1.6
CDH11P55287 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.05□□□□□ -1.6
CDH11P55287 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
CDH11P55287 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDH11P55287 AL138820.1-201ENST00000617901 5305 ntBASIC5.04□□□□□ -1.6
CDH11P55287 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDH11P55287 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDH11P55287 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH11P55287 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDH11P55287 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.04□□□□□ -1.6
CDH11P55287 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.04□□□□□ -1.6
CDH11P55287 PWAR1-201ENST00000624188 2414 ntBASIC5.04□□□□□ -1.6
CDH11P55287 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDH11P55287 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CDH11P55287 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.04□□□□□ -1.6
CDH11P55287 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDH11P55287 U3.7-201ENST00000363668 216 ntBASIC5.04□□□□□ -1.6
CDH11P55287 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDH11P55287 SNORD56.6-201ENST00000384569 71 ntBASIC5.04□□□□□ -1.6
CDH11P55287 U3.25-201ENST00000391209 220 ntBASIC5.04□□□□□ -1.6
CDH11P55287 RN7SKP293-201ENST00000411389 296 ntBASIC5.04□□□□□ -1.6
CDH11P55287 AL356968.2-201ENST00000412769 1257 ntBASIC5.04□□□□□ -1.6
CDH11P55287 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.04□□□□□ -1.6
CDH11P55287 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.04□□□□□ -1.6
CDH11P55287 RPL7P56-201ENST00000429441 717 ntBASIC5.04□□□□□ -1.6
CDH11P55287 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.04□□□□□ -1.6
CDH11P55287 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH11P55287 NPM1P19-201ENST00000450070 712 ntBASIC5.04□□□□□ -1.6
CDH11P55287 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.04□□□□□ -1.6
CDH11P55287 EIF2S2P4-201ENST00000461070 984 ntBASIC5.04□□□□□ -1.6
CDH11P55287 AC074386.1-201ENST00000476560 767 ntBASIC5.04□□□□□ -1.6
CDH11P55287 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH11P55287 AC021193.1-201ENST00000511607 420 ntBASIC5.04□□□□□ -1.6
CDH11P55287 RNA5SP362-201ENST00000516048 118 ntBASIC5.04□□□□□ -1.6
CDH11P55287 AC008147.3-201ENST00000548666 354 ntBASIC5.04□□□□□ -1.6
CDH11P55287 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.04□□□□□ -1.6
CDH11P55287 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.04□□□□□ -1.6
CDH11P55287 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.04□□□□□ -1.6
CDH11P55287 AC015922.4-201ENST00000612568 690 ntBASIC5.04□□□□□ -1.6
CDH11P55287 MIR6826-201ENST00000617808 98 ntBASIC5.04□□□□□ -1.6
CDH11P55287 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.04□□□□□ -1.6
CDH11P55287 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CDH11P55287 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDH11P55287 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CDH11P55287 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
CDH11P55287 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CDH11P55287 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CDH11P55287 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CDH11P55287 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH11P55287 PCAT14-202ENST00000627127 3935 ntBASIC5.04□□□□□ -1.6
CDH11P55287 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH11P55287 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDH11P55287 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDH11P55287 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDH11P55287 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH11P55287 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDH11P55287 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CDH11P55287 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH11P55287 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH11P55287 SNORD51.1-201ENST00000365405 77 ntBASIC5.03□□□□□ -1.6
CDH11P55287 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH11P55287 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH11P55287 MIR143-201ENST00000385300 106 ntBASIC5.03□□□□□ -1.6
CDH11P55287 RNU6-1176P-201ENST00000390955 107 ntBASIC5.03□□□□□ -1.6
CDH11P55287 ST13P16-201ENST00000401760 781 ntBASIC5.03□□□□□ -1.6
CDH11P55287 RPS6P23-201ENST00000413224 722 ntBASIC5.03□□□□□ -1.6
CDH11P55287 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH11P55287 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDH11P55287 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.03□□□□□ -1.6
CDH11P55287 AL121776.1-201ENST00000429337 372 ntBASIC5.03□□□□□ -1.6
CDH11P55287 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDH11P55287 XKRY2-201ENST00000442362 1093 ntBASIC5.03□□□□□ -1.6
CDH11P55287 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDH11P55287 LRRC37A14P-201ENST00000452297 462 ntBASIC5.03□□□□□ -1.6
CDH11P55287 MTND2P30-201ENST00000456663 382 ntBASIC5.03□□□□□ -1.6
CDH11P55287 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH11P55287 AC015908.1-201ENST00000478739 476 ntBASIC5.03□□□□□ -1.6
CDH11P55287 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH11P55287 RN7SL214P-201ENST00000487317 265 ntBASIC5.03□□□□□ -1.6
CDH11P55287 AC073610.1-201ENST00000489971 396 ntBASIC5.03□□□□□ -1.6
CDH11P55287 AC138409.2-202ENST00000507274 458 ntBASIC5.03□□□□□ -1.6
CDH11P55287 RNU6-319P-201ENST00000516025 108 ntBASIC5.03□□□□□ -1.6
CDH11P55287 RNA5SP230-201ENST00000517039 122 ntBASIC5.03□□□□□ -1.6
CDH11P55287 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH11P55287 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDH11P55287 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH11P55287 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH11P55287 AC138832.1-201ENST00000522871 556 ntBASIC5.03□□□□□ -1.6
CDH11P55287 IGBP1P1-201ENST00000554337 1009 ntBASIC5.03□□□□□ -1.6
CDH11P55287 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH11P55287 AL359219.2-201ENST00000555184 348 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms