Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.28□□□□□ -1.56
PDX1P52945 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.28□□□□□ -1.56
PDX1P52945 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.28□□□□□ -1.56
PDX1P52945 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.28□□□□□ -1.56
PDX1P52945 OR1F2P-201ENST00000570470 933 ntBASIC5.28□□□□□ -1.56
PDX1P52945 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.28□□□□□ -1.56
PDX1P52945 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.28□□□□□ -1.56
PDX1P52945 AC109583.2-201ENST00000617367 129 ntBASIC5.28□□□□□ -1.56
PDX1P52945 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.28□□□□□ -1.56
PDX1P52945 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
PDX1P52945 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
PDX1P52945 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PDX1P52945 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.28□□□□□ -1.56
PDX1P52945 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.28□□□□□ -1.56
PDX1P52945 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDX1P52945 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDX1P52945 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PDX1P52945 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.28□□□□□ -1.56
PDX1P52945 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PDX1P52945 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDX1P52945 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
PDX1P52945 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.27□□□□□ -1.57
PDX1P52945 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.27□□□□□ -1.57
PDX1P52945 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.27□□□□□ -1.57
PDX1P52945 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDX1P52945 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PDX1P52945 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.27□□□□□ -1.57
PDX1P52945 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDX1P52945 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDX1P52945 SNORA67-201ENST00000384423 137 ntBASIC5.27□□□□□ -1.57
PDX1P52945 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PDX1P52945 NPM1P37-201ENST00000403105 874 ntBASIC5.27□□□□□ -1.57
PDX1P52945 DUTP5-201ENST00000406790 469 ntBASIC5.27□□□□□ -1.57
PDX1P52945 RBMY2KP-201ENST00000418221 992 ntBASIC5.27□□□□□ -1.57
PDX1P52945 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.27□□□□□ -1.57
PDX1P52945 SRSF1P1-201ENST00000424058 520 ntBASIC5.27□□□□□ -1.57
PDX1P52945 OR10T1P-201ENST00000424327 947 ntBASIC5.27□□□□□ -1.57
PDX1P52945 AL445528.1-201ENST00000426330 420 ntBASIC5.27□□□□□ -1.57
PDX1P52945 FAM96AP1-201ENST00000430879 482 ntBASIC5.27□□□□□ -1.57
PDX1P52945 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PDX1P52945 ZFAND6P1-201ENST00000434138 605 ntBASIC5.27□□□□□ -1.57
PDX1P52945 VN1R54P-201ENST00000435210 1049 ntBASIC5.27□□□□□ -1.57
PDX1P52945 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.27□□□□□ -1.57
PDX1P52945 MTND6P5-201ENST00000448266 512 ntBASIC5.27□□□□□ -1.57
PDX1P52945 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.27□□□□□ -1.57
PDX1P52945 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.27□□□□□ -1.57
PDX1P52945 AC105918.1-201ENST00000474399 838 ntBASIC5.27□□□□□ -1.57
PDX1P52945 RPL7P6-201ENST00000480903 738 ntBASIC5.27□□□□□ -1.57
PDX1P52945 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PDX1P52945 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.27□□□□□ -1.57
PDX1P52945 CDH12P4-201ENST00000517835 295 ntBASIC5.27□□□□□ -1.57
PDX1P52945 CDH12P3-201ENST00000517935 295 ntBASIC5.27□□□□□ -1.57
PDX1P52945 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.27□□□□□ -1.57
PDX1P52945 SEC11B-201ENST00000518383 499 ntBASIC5.27□□□□□ -1.57
PDX1P52945 CDH12P1-201ENST00000518435 295 ntBASIC5.27□□□□□ -1.57
PDX1P52945 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.27□□□□□ -1.57
PDX1P52945 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PDX1P52945 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
PDX1P52945 AP000619.2-201ENST00000546014 969 ntBASIC5.27□□□□□ -1.57
PDX1P52945 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.27□□□□□ -1.57
PDX1P52945 RPL10P14-201ENST00000565265 298 ntBASIC5.27□□□□□ -1.57
PDX1P52945 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.27□□□□□ -1.57
PDX1P52945 MIR4436B2-201ENST00000581415 91 ntBASIC5.27□□□□□ -1.57
PDX1P52945 MIR4436B1-201ENST00000583272 91 ntBASIC5.27□□□□□ -1.57
PDX1P52945 AC006116.3-201ENST00000592968 361 ntBASIC5.27□□□□□ -1.57
PDX1P52945 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.27□□□□□ -1.57
PDX1P52945 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.27□□□□□ -1.57
PDX1P52945 AL049539.1-201ENST00000611964 459 ntBASIC5.27□□□□□ -1.57
PDX1P52945 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PDX1P52945 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.27□□□□□ -1.57
PDX1P52945 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDX1P52945 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.27□□□□□ -1.57
PDX1P52945 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDX1P52945 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.26□□□□□ -1.57
PDX1P52945 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDX1P52945 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
PDX1P52945 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.26□□□□□ -1.57
PDX1P52945 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
PDX1P52945 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
PDX1P52945 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
PDX1P52945 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
PDX1P52945 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDX1P52945 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PDX1P52945 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.26□□□□□ -1.57
PDX1P52945 AL121886.1-201ENST00000358609 435 ntBASIC5.26□□□□□ -1.57
PDX1P52945 AL133388.1-201ENST00000404509 287 ntBASIC5.26□□□□□ -1.57
PDX1P52945 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDX1P52945 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.26□□□□□ -1.57
PDX1P52945 RPS26P13-201ENST00000419030 330 ntBASIC5.26□□□□□ -1.57
PDX1P52945 AC013470.3-201ENST00000420252 1194 ntBASIC5.26□□□□□ -1.57
PDX1P52945 AC007161.1-204ENST00000423039 460 ntBASIC5.26□□□□□ -1.57
PDX1P52945 AC099670.2-201ENST00000435130 321 ntBASIC5.26□□□□□ -1.57
PDX1P52945 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.26□□□□□ -1.57
PDX1P52945 TXNP2-201ENST00000443918 295 ntBASIC5.26□□□□□ -1.57
PDX1P52945 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDX1P52945 AL596266.1-201ENST00000448132 400 ntBASIC5.26□□□□□ -1.57
PDX1P52945 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.26□□□□□ -1.57
PDX1P52945 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.26□□□□□ -1.57
PDX1P52945 AC022336.1-201ENST00000475510 337 ntBASIC5.26□□□□□ -1.57
PDX1P52945 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms