Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
RFC1P35251 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.77□□□□□ -1.49
RFC1P35251 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFC1P35251 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
RFC1P35251 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFC1P35251 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.76□□□□□ -1.49
RFC1P35251 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFC1P35251 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.76□□□□□ -1.49
RFC1P35251 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.76□□□□□ -1.49
RFC1P35251 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFC1P35251 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
RFC1P35251 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.76□□□□□ -1.49
RFC1P35251 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFC1P35251 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.76□□□□□ -1.49
RFC1P35251 AC003985.2-201ENST00000562268 1669 ntBASIC5.76□□□□□ -1.49
RFC1P35251 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RFC1P35251 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFC1P35251 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFC1P35251 RN7SKP28-201ENST00000364770 305 ntBASIC5.76□□□□□ -1.49
RFC1P35251 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
RFC1P35251 RNU6-729P-201ENST00000384399 107 ntBASIC5.76□□□□□ -1.49
RFC1P35251 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
RFC1P35251 SDHDP6-201ENST00000414693 480 ntBASIC5.76□□□□□ -1.49
RFC1P35251 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.76□□□□□ -1.49
RFC1P35251 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.76□□□□□ -1.49
RFC1P35251 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.76□□□□□ -1.49
RFC1P35251 ELOCP6-201ENST00000429066 328 ntBASIC5.76□□□□□ -1.49
RFC1P35251 AC092106.1-201ENST00000444291 373 ntBASIC5.76□□□□□ -1.49
RFC1P35251 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.76□□□□□ -1.49
RFC1P35251 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.76□□□□□ -1.49
RFC1P35251 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC5.76□□□□□ -1.49
RFC1P35251 ELOCP12-201ENST00000458706 328 ntBASIC5.76□□□□□ -1.49
RFC1P35251 ABCC13-202ENST00000463099 3842 ntBASIC5.76□□□□□ -1.49
RFC1P35251 RPL12P24-201ENST00000474907 486 ntBASIC5.76□□□□□ -1.49
RFC1P35251 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFC1P35251 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.76□□□□□ -1.49
RFC1P35251 AC112191.2-201ENST00000522428 333 ntBASIC5.76□□□□□ -1.49
RFC1P35251 MTND5P21-201ENST00000531961 522 ntBASIC5.76□□□□□ -1.49
RFC1P35251 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.76□□□□□ -1.49
RFC1P35251 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFC1P35251 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.76□□□□□ -1.49
RFC1P35251 MIR3614-201ENST00000581261 86 ntBASIC5.76□□□□□ -1.49
RFC1P35251 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.76□□□□□ -1.49
RFC1P35251 AC008521.2-201ENST00000591021 259 ntBASIC5.76□□□□□ -1.49
RFC1P35251 AC012616.1-201ENST00000600294 197 ntBASIC5.76□□□□□ -1.49
RFC1P35251 AC005776.1-201ENST00000603164 290 ntBASIC5.76□□□□□ -1.49
RFC1P35251 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.76□□□□□ -1.49
RFC1P35251 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.76□□□□□ -1.49
RFC1P35251 AL118522.2-201ENST00000616045 615 ntBASIC5.76□□□□□ -1.49
RFC1P35251 AC099654.6-201ENST00000636487 512 ntBASIC5.76□□□□□ -1.49
RFC1P35251 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFC1P35251 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RFC1P35251 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RFC1P35251 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFC1P35251 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RFC1P35251 AC087565.3-202ENST00000642085 1603 ntBASIC5.76□□□□□ -1.49
RFC1P35251 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.76□□□□□ -1.49
RFC1P35251 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFC1P35251 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.76□□□□□ -1.49
RFC1P35251 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RFC1P35251 AC107021.2-201ENST00000567714 2095 ntBASIC5.76□□□□□ -1.49
RFC1P35251 AC004158.1-201ENST00000564508 4319 ntBASIC5.76□□□□□ -1.49
RFC1P35251 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RFC1P35251 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RFC1P35251 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
RFC1P35251 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RFC1P35251 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.76□□□□□ -1.49
RFC1P35251 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RFC1P35251 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.75□□□□□ -1.49
RFC1P35251 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RFC1P35251 AC010266.2-201ENST00000564741 3255 ntBASIC5.75□□□□□ -1.49
RFC1P35251 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RFC1P35251 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
RFC1P35251 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.75□□□□□ -1.49
RFC1P35251 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.75□□□□□ -1.49
RFC1P35251 MTCO1P15-201ENST00000529569 1526 ntBASIC5.75□□□□□ -1.49
RFC1P35251 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.75□□□□□ -1.49
RFC1P35251 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
RFC1P35251 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RFC1P35251 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.75□□□□□ -1.49
RFC1P35251 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.75□□□□□ -1.49
RFC1P35251 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.75□□□□□ -1.49
RFC1P35251 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
RFC1P35251 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RFC1P35251 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.75□□□□□ -1.49
RFC1P35251 SNORA70.6-201ENST00000383934 134 ntBASIC5.75□□□□□ -1.49
RFC1P35251 SNORA16A-201ENST00000384342 137 ntBASIC5.75□□□□□ -1.49
RFC1P35251 AL031985.1-201ENST00000392713 418 ntBASIC5.75□□□□□ -1.49
RFC1P35251 PPIAP9-201ENST00000403866 498 ntBASIC5.75□□□□□ -1.49
RFC1P35251 AC009784.1-201ENST00000426484 460 ntBASIC5.75□□□□□ -1.49
RFC1P35251 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.75□□□□□ -1.49
RFC1P35251 AC073508.1-201ENST00000428866 656 ntBASIC5.75□□□□□ -1.49
RFC1P35251 AC023141.6-201ENST00000429418 337 ntBASIC5.75□□□□□ -1.49
RFC1P35251 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RFC1P35251 NPM1P18-201ENST00000434232 732 ntBASIC5.75□□□□□ -1.49
RFC1P35251 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
RFC1P35251 AL158053.1-201ENST00000441503 453 ntBASIC5.75□□□□□ -1.49
RFC1P35251 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.75□□□□□ -1.49
RFC1P35251 RPL31P15-201ENST00000449770 338 ntBASIC5.75□□□□□ -1.49
RFC1P35251 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms