Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.13□□□□□ -1.59
PTPN6P29350 AL589674.2-201ENST00000604304 337 ntBASIC5.13□□□□□ -1.59
PTPN6P29350 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.13□□□□□ -1.59
PTPN6P29350 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.13□□□□□ -1.59
PTPN6P29350 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.13□□□□□ -1.59
PTPN6P29350 AL049767.1-202ENST00000637826 242 ntBASIC5.13□□□□□ -1.59
PTPN6P29350 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.13□□□□□ -1.59
PTPN6P29350 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
PTPN6P29350 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.13□□□□□ -1.59
PTPN6P29350 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PTPN6P29350 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PTPN6P29350 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.13□□□□□ -1.59
PTPN6P29350 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PTPN6P29350 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PTPN6P29350 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
PTPN6P29350 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTPN6P29350 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
PTPN6P29350 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PTPN6P29350 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PTPN6P29350 U3.25-201ENST00000391209 220 ntBASIC5.12□□□□□ -1.59
PTPN6P29350 EI24P3-201ENST00000399046 1062 ntBASIC5.12□□□□□ -1.59
PTPN6P29350 AL391422.1-201ENST00000402155 436 ntBASIC5.12□□□□□ -1.59
PTPN6P29350 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.12□□□□□ -1.59
PTPN6P29350 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.12□□□□□ -1.59
PTPN6P29350 RPL12P9-201ENST00000412942 488 ntBASIC5.12□□□□□ -1.59
PTPN6P29350 HMGN2P27-201ENST00000427352 270 ntBASIC5.12□□□□□ -1.59
PTPN6P29350 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.12□□□□□ -1.59
PTPN6P29350 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PTPN6P29350 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.12□□□□□ -1.59
PTPN6P29350 GAPDHP14-201ENST00000450472 937 ntBASIC5.12□□□□□ -1.59
PTPN6P29350 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.12□□□□□ -1.59
PTPN6P29350 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.12□□□□□ -1.59
PTPN6P29350 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.12□□□□□ -1.59
PTPN6P29350 RNA5SP362-201ENST00000516048 118 ntBASIC5.12□□□□□ -1.59
PTPN6P29350 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.12□□□□□ -1.59
PTPN6P29350 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.12□□□□□ -1.59
PTPN6P29350 AL359219.2-201ENST00000555184 348 ntBASIC5.12□□□□□ -1.59
PTPN6P29350 EIF1AXP2-201ENST00000555940 413 ntBASIC5.12□□□□□ -1.59
PTPN6P29350 NMNAT1P5-201ENST00000559657 841 ntBASIC5.12□□□□□ -1.59
PTPN6P29350 MRPS21P7-201ENST00000566937 238 ntBASIC5.12□□□□□ -1.59
PTPN6P29350 AC007448.1-201ENST00000582714 234 ntBASIC5.12□□□□□ -1.59
PTPN6P29350 AC060766.1-201ENST00000590824 627 ntBASIC5.12□□□□□ -1.59
PTPN6P29350 PPATP2-201ENST00000605635 508 ntBASIC5.12□□□□□ -1.59
PTPN6P29350 AC117490.2-201ENST00000610042 594 ntBASIC5.12□□□□□ -1.59
PTPN6P29350 AP001005.3-201ENST00000622049 129 ntBASIC5.12□□□□□ -1.59
PTPN6P29350 AC091932.2-201ENST00000623014 291 ntBASIC5.12□□□□□ -1.59
PTPN6P29350 FRG1EP-201ENST00000634469 770 ntBASIC5.12□□□□□ -1.59
PTPN6P29350 TRIM51GP-201ENST00000534741 1350 ntBASIC5.12□□□□□ -1.59
PTPN6P29350 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTPN6P29350 STX3-208ENST00000641815 3236 ntBASIC5.12□□□□□ -1.59
PTPN6P29350 AC073136.1-201ENST00000449426 2884 ntBASIC5.11□□□□□ -1.59
PTPN6P29350 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN6P29350 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN6P29350 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
PTPN6P29350 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN6P29350 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN6P29350 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN6P29350 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PTPN6P29350 RN7SKP124-201ENST00000364730 341 ntBASIC5.11□□□□□ -1.59
PTPN6P29350 SNORA16A-201ENST00000384342 137 ntBASIC5.11□□□□□ -1.59
PTPN6P29350 MIR551A-201ENST00000385042 96 ntBASIC5.11□□□□□ -1.59
PTPN6P29350 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN6P29350 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.11□□□□□ -1.59
PTPN6P29350 AC124944.2-201ENST00000429866 1242 ntBASIC5.11□□□□□ -1.59
PTPN6P29350 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.11□□□□□ -1.59
PTPN6P29350 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.11□□□□□ -1.59
PTPN6P29350 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.11□□□□□ -1.59
PTPN6P29350 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.11□□□□□ -1.59
PTPN6P29350 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.11□□□□□ -1.59
PTPN6P29350 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.11□□□□□ -1.59
PTPN6P29350 HMGN1P8-201ENST00000463578 288 ntBASIC5.11□□□□□ -1.59
PTPN6P29350 EIF3LP3-201ENST00000495197 822 ntBASIC5.11□□□□□ -1.59
PTPN6P29350 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.11□□□□□ -1.59
PTPN6P29350 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.11□□□□□ -1.59
PTPN6P29350 AC109464.1-201ENST00000511091 819 ntBASIC5.11□□□□□ -1.59
PTPN6P29350 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.11□□□□□ -1.59
PTPN6P29350 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PTPN6P29350 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.11□□□□□ -1.59
PTPN6P29350 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.11□□□□□ -1.59
PTPN6P29350 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.11□□□□□ -1.59
PTPN6P29350 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.11□□□□□ -1.59
PTPN6P29350 CD24P2-201ENST00000565486 219 ntBASIC5.11□□□□□ -1.59
PTPN6P29350 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.11□□□□□ -1.59
PTPN6P29350 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
PTPN6P29350 AC010503.3-201ENST00000594355 540 ntBASIC5.11□□□□□ -1.59
PTPN6P29350 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.11□□□□□ -1.59
PTPN6P29350 AC008833.1-201ENST00000611633 691 ntBASIC5.11□□□□□ -1.59
PTPN6P29350 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.11□□□□□ -1.59
PTPN6P29350 AL121890.2-201ENST00000617644 465 ntBASIC5.11□□□□□ -1.59
PTPN6P29350 AF117829.2-201ENST00000619538 361 ntBASIC5.11□□□□□ -1.59
PTPN6P29350 AP003400.3-201ENST00000624904 346 ntBASIC5.11□□□□□ -1.59
PTPN6P29350 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN6P29350 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN6P29350 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN6P29350 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.11□□□□□ -1.59
PTPN6P29350 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN6P29350 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.11□□□□□ -1.59
PTPN6P29350 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.11□□□□□ -1.59
PTPN6P29350 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.11□□□□□ -1.59
PTPN6P29350 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms