Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC7.54□□□□□ -1.2
VARSP26640 PHBP17-201ENST00000528576 541 ntBASIC7.54□□□□□ -1.2
VARSP26640 AP000790.1-201ENST00000528891 737 ntBASIC7.54□□□□□ -1.2
VARSP26640 OR7E1P-201ENST00000533891 958 ntBASIC7.54□□□□□ -1.2
VARSP26640 OR4N1P-201ENST00000554847 949 ntBASIC7.54□□□□□ -1.2
VARSP26640 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
VARSP26640 MIR5705-201ENST00000579870 89 ntBASIC7.54□□□□□ -1.2
VARSP26640 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.54□□□□□ -1.2
VARSP26640 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
VARSP26640 NDUFB9P1-201ENST00000604683 510 ntBASIC7.54□□□□□ -1.2
VARSP26640 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC7.54□□□□□ -1.2
VARSP26640 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC7.54□□□□□ -1.2
VARSP26640 DLST-216ENST00000626051 252 ntTSL 5 BASIC7.54□□□□□ -1.2
VARSP26640 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC7.54□□□□□ -1.2
VARSP26640 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
VARSP26640 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC7.54□□□□□ -1.2
VARSP26640 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
VARSP26640 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
VARSP26640 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
VARSP26640 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
VARSP26640 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
VARSP26640 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC7.54□□□□□ -1.2
VARSP26640 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
VARSP26640 THAP12P1-201ENST00000398672 2203 ntBASIC7.54□□□□□ -1.2
VARSP26640 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
VARSP26640 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
VARSP26640 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC7.53□□□□□ -1.2
VARSP26640 AC016251.2-201ENST00000623393 3089 ntBASIC7.53□□□□□ -1.2
VARSP26640 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
VARSP26640 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
VARSP26640 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
VARSP26640 ZNF101P1-201ENST00000435701 1720 ntBASIC7.53□□□□□ -1.2
VARSP26640 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.53□□□□□ -1.2
VARSP26640 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
VARSP26640 RNU6-1309P-201ENST00000363305 108 ntBASIC7.53□□□□□ -1.2
VARSP26640 SNORD42.2-201ENST00000365570 69 ntBASIC7.53□□□□□ -1.2
VARSP26640 SNORA10-201ENST00000384084 133 ntBASIC7.53□□□□□ -1.2
VARSP26640 RNA5SP185-201ENST00000390963 114 ntBASIC7.53□□□□□ -1.2
VARSP26640 Y_RNA.608-201ENST00000410647 95 ntBASIC7.53□□□□□ -1.2
VARSP26640 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC7.53□□□□□ -1.2
VARSP26640 SPA17P1-201ENST00000416656 452 ntBASIC7.53□□□□□ -1.2
VARSP26640 AC062016.2-201ENST00000420950 676 ntBASIC7.53□□□□□ -1.2
VARSP26640 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC7.53□□□□□ -1.2
VARSP26640 MTCO3P46-201ENST00000425787 232 ntBASIC7.53□□□□□ -1.2
VARSP26640 AL445669.1-201ENST00000426743 755 ntBASIC7.53□□□□□ -1.2
VARSP26640 NPM1P34-201ENST00000428821 893 ntBASIC7.53□□□□□ -1.2
VARSP26640 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC7.53□□□□□ -1.2
VARSP26640 FTH1P16-201ENST00000435241 552 ntBASIC7.53□□□□□ -1.2
VARSP26640 MTND6P18-201ENST00000439477 513 ntBASIC7.53□□□□□ -1.2
VARSP26640 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC7.53□□□□□ -1.2
VARSP26640 EFCAB14P1-201ENST00000442409 463 ntBASIC7.53□□□□□ -1.2
VARSP26640 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC7.53□□□□□ -1.2
VARSP26640 HMGN1P36-201ENST00000446623 298 ntBASIC7.53□□□□□ -1.2
VARSP26640 AC132479.1-201ENST00000449160 144 ntBASIC7.53□□□□□ -1.2
VARSP26640 AC092570.2-201ENST00000452117 1143 ntBASIC7.53□□□□□ -1.2
VARSP26640 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC7.53□□□□□ -1.2
VARSP26640 AC099563.1-201ENST00000456086 418 ntBASIC7.53□□□□□ -1.2
VARSP26640 HSPE1P22-201ENST00000456856 327 ntBASIC7.53□□□□□ -1.2
VARSP26640 SNORD19B-201ENST00000459623 84 ntBASIC7.53□□□□□ -1.2
VARSP26640 AL590326.1-201ENST00000460857 334 ntBASIC7.53□□□□□ -1.2
VARSP26640 NDUFS5P2-201ENST00000484004 306 ntBASIC7.53□□□□□ -1.2
VARSP26640 AL163540.1-201ENST00000485382 386 ntBASIC7.53□□□□□ -1.2
VARSP26640 CDH12P2-201ENST00000504393 298 ntBASIC7.53□□□□□ -1.2
VARSP26640 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC7.53□□□□□ -1.2
VARSP26640 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC7.53□□□□□ -1.2
VARSP26640 NTAN1P2-201ENST00000515730 940 ntBASIC7.53□□□□□ -1.2
VARSP26640 RNA5SP75-201ENST00000516841 111 ntBASIC7.53□□□□□ -1.2
VARSP26640 RNU2-46P-201ENST00000517038 113 ntBASIC7.53□□□□□ -1.2
VARSP26640 AP003467.2-201ENST00000520175 319 ntBASIC7.53□□□□□ -1.2
VARSP26640 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC7.53□□□□□ -1.2
VARSP26640 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC7.53□□□□□ -1.2
VARSP26640 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC7.53□□□□□ -1.2
VARSP26640 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC7.53□□□□□ -1.2
VARSP26640 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC7.53□□□□□ -1.2
VARSP26640 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC7.53□□□□□ -1.2
VARSP26640 AC133565.1-201ENST00000569218 488 ntTSL 3 BASIC7.53□□□□□ -1.2
VARSP26640 AC138915.2-201ENST00000569776 97 ntBASIC7.53□□□□□ -1.2
VARSP26640 AC005668.1-201ENST00000571142 476 ntBASIC7.53□□□□□ -1.2
VARSP26640 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC7.53□□□□□ -1.2
VARSP26640 MIR4503-201ENST00000582187 83 ntBASIC7.53□□□□□ -1.2
VARSP26640 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.53□□□□□ -1.2
VARSP26640 AC090774.2-201ENST00000584708 322 ntBASIC7.53□□□□□ -1.2
VARSP26640 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC7.53□□□□□ -1.2
VARSP26640 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC7.53□□□□□ -1.2
VARSP26640 AC012557.3-201ENST00000626439 255 ntBASIC7.53□□□□□ -1.2
VARSP26640 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC7.53□□□□□ -1.2
VARSP26640 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
VARSP26640 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
VARSP26640 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC7.53□□□□□ -1.2
VARSP26640 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC7.53□□□□□ -1.2
VARSP26640 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC7.53□□□□□ -1.2
VARSP26640 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC7.53□□□□□ -1.2
VARSP26640 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC7.53□□□□□ -1.2
VARSP26640 AC091046.3-201ENST00000631455 1574 ntBASIC7.53□□□□□ -1.2
VARSP26640 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC7.53□□□□□ -1.2
VARSP26640 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
VARSP26640 NCOA4P3-201ENST00000513203 1877 ntBASIC7.53□□□□□ -1.2
VARSP26640 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
VARSP26640 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
VARSP26640 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms