Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC068768.2-201ENST00000602352 343 ntBASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 AP001823.1-201ENST00000604056 1003 ntBASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 AL645933.2-201ENST00000606743 1207 ntBASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 AC007204.2-201ENST00000615022 616 ntBASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 AC008083.4-201ENST00000615076 444 ntBASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 AC007742.2-201ENST00000618226 398 ntBASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 AC245014.3-201ENST00000618589 347 ntBASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 AC074141.1-201ENST00000588129 2995 ntBASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC8.46□□□□□ -1.06
CSB-PGBD3P0DP91 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 CYP2G2P-201ENST00000594920 1485 ntBASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 AL133243.2-201ENST00000610331 1621 ntBASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 RNA5SP273-201ENST00000362484 113 ntBASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 RNU1-134P-201ENST00000362935 165 ntBASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 AL121977.1-201ENST00000401636 979 ntBASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 AL590084.1-201ENST00000407885 387 ntBASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 MTCO1P17-201ENST00000411522 491 ntBASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 AL390774.1-201ENST00000411924 246 ntBASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 AC093084.1-201ENST00000424233 687 ntBASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 ZNF863P-201ENST00000426746 417 ntBASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 AL022331.1-201ENST00000429025 477 ntBASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 AL592447.1-201ENST00000447592 540 ntBASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 RN7SL326P-201ENST00000477493 296 ntBASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 AC117395.1-201ENST00000487390 403 ntBASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 PTK2-220ENST00000520151 573 ntTSL 4 BASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 AC092851.1-201ENST00000535964 478 ntBASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 AC092375.1-201ENST00000550410 637 ntBASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 AP001269.3-201ENST00000588718 329 ntBASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 AC011374.2-201ENST00000607135 526 ntBASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 AC092653.1-201ENST00000608509 531 ntBASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 AP004607.9-201ENST00000618202 316 ntBASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 SPATA2P1-201ENST00000431223 2055 ntBASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 AL512310.3-201ENST00000547023 1335 ntBASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC8.45□□□□□ -1.06
CSB-PGBD3P0DP91 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 AC008627.1-201ENST00000517511 1704 ntBASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 AC010329.1-201ENST00000593903 8328 ntBASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 MTND1P21-201ENST00000412991 285 ntBASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 KRTAP2-5P-201ENST00000446109 396 ntBASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 RHEBP2-201ENST00000450289 600 ntBASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 RN7SL284P-201ENST00000498823 275 ntBASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 RNA5SP438-201ENST00000516561 112 ntBASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC8.44□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms