Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC015660.5-201ENST00000623238 564 ntBASIC3.95□□□□□ -1.78
CXCL1P09341 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC3.95□□□□□ -1.78
CXCL1P09341 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC3.95□□□□□ -1.78
CXCL1P09341 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CXCL1P09341 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CXCL1P09341 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC3.94□□□□□ -1.78
CXCL1P09341 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CXCL1P09341 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC3.94□□□□□ -1.78
CXCL1P09341 AC104966.1-201ENST00000467010 1464 ntBASIC3.94□□□□□ -1.78
CXCL1P09341 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CXCL1P09341 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
CXCL1P09341 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CXCL1P09341 MTHFD2P5-201ENST00000320415 844 ntBASIC3.94□□□□□ -1.78
CXCL1P09341 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CXCL1P09341 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC3.94□□□□□ -1.78
CXCL1P09341 RNU1-20P-201ENST00000363314 162 ntBASIC3.94□□□□□ -1.78
CXCL1P09341 RN7SKP250-201ENST00000363924 321 ntBASIC3.94□□□□□ -1.78
CXCL1P09341 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CXCL1P09341 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC3.94□□□□□ -1.78
CXCL1P09341 SUGT1P2-201ENST00000379452 992 ntBASIC3.94□□□□□ -1.78
CXCL1P09341 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CXCL1P09341 AL050305.1-201ENST00000399993 1230 ntBASIC3.94□□□□□ -1.78
CXCL1P09341 AL359885.1-201ENST00000415786 903 ntBASIC3.94□□□□□ -1.78
CXCL1P09341 Z93019.1-201ENST00000416450 973 ntBASIC3.94□□□□□ -1.78
CXCL1P09341 EIF4EP1-201ENST00000422311 642 ntBASIC3.94□□□□□ -1.78
CXCL1P09341 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC3.94□□□□□ -1.78
CXCL1P09341 NMNAT1P2-201ENST00000435192 860 ntBASIC3.94□□□□□ -1.78
CXCL1P09341 RPL12P49-201ENST00000441100 121 ntBASIC3.94□□□□□ -1.78
CXCL1P09341 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC3.94□□□□□ -1.78
CXCL1P09341 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC3.94□□□□□ -1.78
CXCL1P09341 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC3.94□□□□□ -1.78
CXCL1P09341 RN7SL517P-201ENST00000462240 305 ntBASIC3.94□□□□□ -1.78
CXCL1P09341 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC3.94□□□□□ -1.78
CXCL1P09341 AC092754.1-201ENST00000472975 479 ntBASIC3.94□□□□□ -1.78
CXCL1P09341 RPL29P23-201ENST00000486188 442 ntBASIC3.94□□□□□ -1.78
CXCL1P09341 AC005412.2-201ENST00000492004 341 ntBASIC3.94□□□□□ -1.78
CXCL1P09341 RPS4XP18-201ENST00000495480 763 ntBASIC3.94□□□□□ -1.78
CXCL1P09341 AC106822.1-201ENST00000502647 526 ntBASIC3.94□□□□□ -1.78
CXCL1P09341 LDHAP1-201ENST00000509421 992 ntBASIC3.94□□□□□ -1.78
CXCL1P09341 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC3.94□□□□□ -1.78
CXCL1P09341 SNORA70.20-201ENST00000516848 126 ntBASIC3.94□□□□□ -1.78
CXCL1P09341 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC3.94□□□□□ -1.78
CXCL1P09341 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CXCL1P09341 AC121758.1-202ENST00000556917 658 ntBASIC3.94□□□□□ -1.78
CXCL1P09341 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC3.94□□□□□ -1.78
CXCL1P09341 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC3.94□□□□□ -1.78
CXCL1P09341 MIR4502-201ENST00000580432 81 ntBASIC3.94□□□□□ -1.78
CXCL1P09341 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC3.94□□□□□ -1.78
CXCL1P09341 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC3.94□□□□□ -1.78
CXCL1P09341 AC011500.1-201ENST00000601963 469 ntBASIC3.94□□□□□ -1.78
CXCL1P09341 RPL26P30-202ENST00000602923 645 ntBASIC3.94□□□□□ -1.78
CXCL1P09341 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.94□□□□□ -1.78
CXCL1P09341 AC015813.4-201ENST00000610469 179 ntBASIC3.94□□□□□ -1.78
CXCL1P09341 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.94□□□□□ -1.78
CXCL1P09341 OR8G7P-201ENST00000616658 848 ntBASIC3.94□□□□□ -1.78
CXCL1P09341 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC3.94□□□□□ -1.78
CXCL1P09341 TEX41-293ENST00000630451 690 ntTSL 5 BASIC3.94□□□□□ -1.78
CXCL1P09341 AC055839.1-201ENST00000634467 498 ntBASIC3.94□□□□□ -1.78
CXCL1P09341 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CXCL1P09341 AC087565.3-203ENST00000641018 837 ntBASIC3.94□□□□□ -1.78
CXCL1P09341 OR8G3P-202ENST00000641572 1255 ntBASIC3.94□□□□□ -1.78
CXCL1P09341 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
CXCL1P09341 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
CXCL1P09341 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC3.94□□□□□ -1.78
CXCL1P09341 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC3.94□□□□□ -1.78
CXCL1P09341 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CXCL1P09341 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CXCL1P09341 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CXCL1P09341 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CXCL1P09341 AL133243.3-201ENST00000617415 3004 ntBASIC3.93□□□□□ -1.78
CXCL1P09341 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CXCL1P09341 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CXCL1P09341 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CXCL1P09341 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC3.93□□□□□ -1.78
CXCL1P09341 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CXCL1P09341 RNA5SP433-201ENST00000364491 114 ntBASIC3.93□□□□□ -1.78
CXCL1P09341 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CXCL1P09341 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC3.93□□□□□ -1.78
CXCL1P09341 SNORA66-201ENST00000384792 133 ntBASIC3.93□□□□□ -1.78
CXCL1P09341 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CXCL1P09341 VDAC2P1-201ENST00000399358 958 ntBASIC3.93□□□□□ -1.78
CXCL1P09341 AL390316.1-201ENST00000406279 553 ntBASIC3.93□□□□□ -1.78
CXCL1P09341 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC3.93□□□□□ -1.78
CXCL1P09341 SETP10-201ENST00000424368 814 ntBASIC3.93□□□□□ -1.78
CXCL1P09341 AL139148.1-201ENST00000427122 680 ntBASIC3.93□□□□□ -1.78
CXCL1P09341 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CXCL1P09341 AL161722.2-201ENST00000434731 981 ntBASIC3.93□□□□□ -1.78
CXCL1P09341 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.93□□□□□ -1.78
CXCL1P09341 AL450996.1-201ENST00000445574 1202 ntBASIC3.93□□□□□ -1.78
CXCL1P09341 VDAC2P4-201ENST00000452925 711 ntBASIC3.93□□□□□ -1.78
CXCL1P09341 AL035090.1-201ENST00000454835 332 ntBASIC3.93□□□□□ -1.78
CXCL1P09341 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC3.93□□□□□ -1.78
CXCL1P09341 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC3.93□□□□□ -1.78
CXCL1P09341 HMGB1P44-201ENST00000508597 572 ntBASIC3.93□□□□□ -1.78
CXCL1P09341 AC018797.1-201ENST00000510791 255 ntBASIC3.93□□□□□ -1.78
CXCL1P09341 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC3.93□□□□□ -1.78
CXCL1P09341 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.93□□□□□ -1.78
CXCL1P09341 RNU6-615P-201ENST00000516065 106 ntBASIC3.93□□□□□ -1.78
CXCL1P09341 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC3.93□□□□□ -1.78
CXCL1P09341 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms