Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 KYNUP3-201ENST00000574386 1341 ntBASIC5.91□□□□□ -1.46
MMP3P08254 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.91□□□□□ -1.46
MMP3P08254 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
MMP3P08254 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
MMP3P08254 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
MMP3P08254 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.9□□□□□ -1.46
MMP3P08254 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
MMP3P08254 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
MMP3P08254 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
MMP3P08254 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
MMP3P08254 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
MMP3P08254 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
MMP3P08254 AL137058.3-201ENST00000624531 3099 ntBASIC5.9□□□□□ -1.46
MMP3P08254 RNA5SP123-201ENST00000363244 119 ntBASIC5.9□□□□□ -1.46
MMP3P08254 RNU6-618P-201ENST00000363518 112 ntBASIC5.9□□□□□ -1.46
MMP3P08254 SNORA51.8-201ENST00000384234 132 ntBASIC5.9□□□□□ -1.46
MMP3P08254 NPM1P38-201ENST00000403835 865 ntBASIC5.9□□□□□ -1.46
MMP3P08254 NUDT19P3-201ENST00000404698 555 ntBASIC5.9□□□□□ -1.46
MMP3P08254 AL589655.1-201ENST00000405398 482 ntBASIC5.9□□□□□ -1.46
MMP3P08254 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.9□□□□□ -1.46
MMP3P08254 AL358178.1-201ENST00000407698 397 ntBASIC5.9□□□□□ -1.46
MMP3P08254 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.9□□□□□ -1.46
MMP3P08254 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
MMP3P08254 SETP9-201ENST00000423837 832 ntBASIC5.9□□□□□ -1.46
MMP3P08254 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.9□□□□□ -1.46
MMP3P08254 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.9□□□□□ -1.46
MMP3P08254 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.9□□□□□ -1.46
MMP3P08254 MORF4L1P4-201ENST00000450245 976 ntBASIC5.9□□□□□ -1.46
MMP3P08254 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.9□□□□□ -1.46
MMP3P08254 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.9□□□□□ -1.46
MMP3P08254 AC091912.1-201ENST00000511351 248 ntBASIC5.9□□□□□ -1.46
MMP3P08254 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.9□□□□□ -1.46
MMP3P08254 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC5.9□□□□□ -1.46
MMP3P08254 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.9□□□□□ -1.46
MMP3P08254 AC084824.2-201ENST00000548906 345 ntBASIC5.9□□□□□ -1.46
MMP3P08254 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
MMP3P08254 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.9□□□□□ -1.46
MMP3P08254 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.9□□□□□ -1.46
MMP3P08254 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.9□□□□□ -1.46
MMP3P08254 AC091953.3-201ENST00000623220 236 ntBASIC5.9□□□□□ -1.46
MMP3P08254 AC015660.5-201ENST00000623238 564 ntBASIC5.9□□□□□ -1.46
MMP3P08254 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.9□□□□□ -1.46
MMP3P08254 AC106858.1-201ENST00000637497 429 ntBASIC5.9□□□□□ -1.46
MMP3P08254 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
MMP3P08254 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
MMP3P08254 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.9□□□□□ -1.47
MMP3P08254 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.47
MMP3P08254 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
MMP3P08254 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
MMP3P08254 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
MMP3P08254 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
MMP3P08254 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
MMP3P08254 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
MMP3P08254 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
MMP3P08254 THAP12P4-201ENST00000528321 2266 ntBASIC5.9□□□□□ -1.47
MMP3P08254 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
MMP3P08254 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
MMP3P08254 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
MMP3P08254 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
MMP3P08254 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
MMP3P08254 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.89□□□□□ -1.47
MMP3P08254 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.89□□□□□ -1.47
MMP3P08254 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.89□□□□□ -1.47
MMP3P08254 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.89□□□□□ -1.47
MMP3P08254 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
MMP3P08254 AL359715.3-201ENST00000569267 2123 ntBASIC5.89□□□□□ -1.47
MMP3P08254 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
MMP3P08254 AC015799.1-201ENST00000622996 3122 ntBASIC5.89□□□□□ -1.47
MMP3P08254 AL078595.2-201ENST00000605309 1780 ntBASIC5.89□□□□□ -1.47
MMP3P08254 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
MMP3P08254 RNU6-670P-201ENST00000364312 104 ntBASIC5.89□□□□□ -1.47
MMP3P08254 U3.10-201ENST00000364459 214 ntBASIC5.89□□□□□ -1.47
MMP3P08254 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.89□□□□□ -1.47
MMP3P08254 RNU6-1176P-201ENST00000390955 107 ntBASIC5.89□□□□□ -1.47
MMP3P08254 UBE2V1P15-201ENST00000407776 448 ntBASIC5.89□□□□□ -1.47
MMP3P08254 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.89□□□□□ -1.47
MMP3P08254 AC006466.1-201ENST00000438721 289 ntBASIC5.89□□□□□ -1.47
MMP3P08254 AC073465.2-201ENST00000440938 498 ntBASIC5.89□□□□□ -1.47
MMP3P08254 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.89□□□□□ -1.47
MMP3P08254 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.89□□□□□ -1.47
MMP3P08254 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
MMP3P08254 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.89□□□□□ -1.47
MMP3P08254 RPS3AP41-201ENST00000462701 778 ntBASIC5.89□□□□□ -1.47
MMP3P08254 AC097484.1-201ENST00000471148 389 ntBASIC5.89□□□□□ -1.47
MMP3P08254 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.89□□□□□ -1.47
MMP3P08254 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.89□□□□□ -1.47
MMP3P08254 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.89□□□□□ -1.47
MMP3P08254 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.89□□□□□ -1.47
MMP3P08254 SCARNA20.4-201ENST00000516969 131 ntBASIC5.89□□□□□ -1.47
MMP3P08254 OR10D4P-201ENST00000525892 951 ntBASIC5.89□□□□□ -1.47
MMP3P08254 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.89□□□□□ -1.47
MMP3P08254 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.89□□□□□ -1.47
MMP3P08254 MTND4LP25-201ENST00000570218 163 ntBASIC5.89□□□□□ -1.47
MMP3P08254 OOSP1P2-201ENST00000579644 351 ntBASIC5.89□□□□□ -1.47
MMP3P08254 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.89□□□□□ -1.47
MMP3P08254 AP001267.4-201ENST00000602598 545 ntBASIC5.89□□□□□ -1.47
MMP3P08254 AC009027.1-201ENST00000604510 479 ntBASIC5.89□□□□□ -1.47
MMP3P08254 AC009032.1-201ENST00000617574 431 ntBASIC5.89□□□□□ -1.47
MMP3P08254 AL356490.1-201ENST00000623079 479 ntBASIC5.89□□□□□ -1.47
MMP3P08254 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 153.5 ms