Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 CYCSP2-201ENST00000558168 301 ntBASIC6.83□□□□□ -1.32
PDGFAP04085 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.83□□□□□ -1.32
PDGFAP04085 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC6.83□□□□□ -1.32
PDGFAP04085 DYNLL1P1-201ENST00000595442 269 ntBASIC6.83□□□□□ -1.32
PDGFAP04085 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC6.83□□□□□ -1.32
PDGFAP04085 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC6.83□□□□□ -1.32
PDGFAP04085 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC6.83□□□□□ -1.32
PDGFAP04085 AL590282.1-201ENST00000610379 1136 ntBASIC6.83□□□□□ -1.32
PDGFAP04085 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC6.83□□□□□ -1.32
PDGFAP04085 AL049541.2-201ENST00000626377 555 ntBASIC6.83□□□□□ -1.32
PDGFAP04085 AC073488.8-201ENST00000631952 757 ntBASIC6.83□□□□□ -1.32
PDGFAP04085 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.83□□□□□ -1.32
PDGFAP04085 AC026634.1-201ENST00000634369 198 ntBASIC6.83□□□□□ -1.32
PDGFAP04085 AL596275.2-208ENST00000641192 594 ntBASIC6.83□□□□□ -1.32
PDGFAP04085 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PDGFAP04085 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
PDGFAP04085 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PDGFAP04085 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
PDGFAP04085 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC6.83□□□□□ -1.32
PDGFAP04085 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
PDGFAP04085 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
PDGFAP04085 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PDGFAP04085 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
PDGFAP04085 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.83□□□□□ -1.32
PDGFAP04085 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
PDGFAP04085 MBTPS2-201ENST00000365779 4457 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PDGFAP04085 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
PDGFAP04085 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
PDGFAP04085 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC6.83□□□□□ -1.32
PDGFAP04085 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC6.83□□□□□ -1.32
PDGFAP04085 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PDGFAP04085 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PDGFAP04085 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.82□□□□□ -1.32
PDGFAP04085 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PDGFAP04085 AGR2-203ENST00000419304 1778 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PDGFAP04085 CUBNP3-201ENST00000457461 1784 ntBASIC6.82□□□□□ -1.32
PDGFAP04085 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC6.82□□□□□ -1.32
PDGFAP04085 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
PDGFAP04085 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PDGFAP04085 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PDGFAP04085 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
PDGFAP04085 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.82□□□□□ -1.32
PDGFAP04085 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
PDGFAP04085 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PDGFAP04085 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PDGFAP04085 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.82□□□□□ -1.32
PDGFAP04085 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PDGFAP04085 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PDGFAP04085 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PDGFAP04085 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
PDGFAP04085 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.82□□□□□ -1.32
PDGFAP04085 AC131971.1-201ENST00000332881 1482 ntBASIC6.82□□□□□ -1.32
PDGFAP04085 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
PDGFAP04085 Y_RNA.97-201ENST00000363094 102 ntBASIC6.82□□□□□ -1.32
PDGFAP04085 RNU12-2P-201ENST00000364789 156 ntBASIC6.82□□□□□ -1.32
PDGFAP04085 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.82□□□□□ -1.32
PDGFAP04085 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC6.82□□□□□ -1.32
PDGFAP04085 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
PDGFAP04085 ERMN-204ENST00000409925 556 ntTSL 4 BASIC6.82□□□□□ -1.32
PDGFAP04085 AL136133.1-201ENST00000413694 376 ntBASIC6.82□□□□□ -1.32
PDGFAP04085 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC6.82□□□□□ -1.32
PDGFAP04085 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.82□□□□□ -1.32
PDGFAP04085 AL161626.1-201ENST00000441480 490 ntBASIC6.82□□□□□ -1.32
PDGFAP04085 AC079781.1-201ENST00000441505 394 ntBASIC6.82□□□□□ -1.32
PDGFAP04085 USP9YP8-201ENST00000441913 500 ntBASIC6.82□□□□□ -1.32
PDGFAP04085 YWHAQP9-201ENST00000445891 512 ntBASIC6.82□□□□□ -1.32
PDGFAP04085 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC6.82□□□□□ -1.32
PDGFAP04085 OFD1P4Y-201ENST00000455273 1179 ntBASIC6.82□□□□□ -1.32
PDGFAP04085 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC6.82□□□□□ -1.32
PDGFAP04085 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC6.82□□□□□ -1.32
PDGFAP04085 RPS4XP17-201ENST00000479057 754 ntBASIC6.82□□□□□ -1.32
PDGFAP04085 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.82□□□□□ -1.32
PDGFAP04085 RN7SL655P-201ENST00000486087 298 ntBASIC6.82□□□□□ -1.32
PDGFAP04085 AC069439.1-201ENST00000494739 167 ntBASIC6.82□□□□□ -1.32
PDGFAP04085 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.82□□□□□ -1.32
PDGFAP04085 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC6.82□□□□□ -1.32
PDGFAP04085 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
PDGFAP04085 RNU6-583P-201ENST00000516012 92 ntBASIC6.82□□□□□ -1.32
PDGFAP04085 SNORA18.6-201ENST00000516792 115 ntBASIC6.82□□□□□ -1.32
PDGFAP04085 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.82□□□□□ -1.32
PDGFAP04085 CASC19-203ENST00000523510 575 ntTSL 3 BASIC6.82□□□□□ -1.32
PDGFAP04085 OR5D2P-201ENST00000524390 911 ntBASIC6.82□□□□□ -1.32
PDGFAP04085 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC6.82□□□□□ -1.32
PDGFAP04085 AC016152.1-201ENST00000548344 521 ntTSL 3 BASIC6.82□□□□□ -1.32
PDGFAP04085 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.82□□□□□ -1.32
PDGFAP04085 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC6.82□□□□□ -1.32
PDGFAP04085 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC6.82□□□□□ -1.32
PDGFAP04085 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.82□□□□□ -1.32
PDGFAP04085 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.82□□□□□ -1.32
PDGFAP04085 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC6.82□□□□□ -1.32
PDGFAP04085 AC063977.5-201ENST00000601044 974 ntBASIC6.82□□□□□ -1.32
PDGFAP04085 AC005518.2-201ENST00000603254 282 ntBASIC6.82□□□□□ -1.32
PDGFAP04085 COX6CP16-201ENST00000603667 216 ntBASIC6.82□□□□□ -1.32
PDGFAP04085 AL451085.1-201ENST00000604546 690 ntBASIC6.82□□□□□ -1.32
PDGFAP04085 AC128687.2-201ENST00000609657 566 ntBASIC6.82□□□□□ -1.32
PDGFAP04085 AC008115.3-201ENST00000614874 549 ntBASIC6.82□□□□□ -1.32
PDGFAP04085 AC136475.10-201ENST00000620253 385 ntBASIC6.82□□□□□ -1.32
PDGFAP04085 AL359880.1-201ENST00000621879 266 ntBASIC6.82□□□□□ -1.32
PDGFAP04085 uc_338.21-201ENST00000622458 147 ntBASIC6.82□□□□□ -1.32
PDGFAP04085 AC012629.3-201ENST00000623397 328 ntBASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 160.6 ms