Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
NKX2-2O95096 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-2O95096 AC018809.2-201ENST00000602436 3823 ntBASIC5.16□□□□□ -1.58
NKX2-2O95096 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-2O95096 YES1P1-201ENST00000418510 1628 ntBASIC5.16□□□□□ -1.58
NKX2-2O95096 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
NKX2-2O95096 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-2O95096 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
NKX2-2O95096 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-2O95096 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-2O95096 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-2O95096 AC092681.1-201ENST00000297369 291 ntBASIC5.16□□□□□ -1.58
NKX2-2O95096 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-2O95096 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-2O95096 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
NKX2-2O95096 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.16□□□□□ -1.58
NKX2-2O95096 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.16□□□□□ -1.58
NKX2-2O95096 RNA5SP284-201ENST00000384547 118 ntBASIC5.16□□□□□ -1.58
NKX2-2O95096 RNU6-796P-201ENST00000391086 107 ntBASIC5.16□□□□□ -1.58
NKX2-2O95096 AL136131.1-201ENST00000406079 803 ntBASIC5.16□□□□□ -1.58
NKX2-2O95096 AL034374.1-201ENST00000406329 351 ntBASIC5.16□□□□□ -1.58
NKX2-2O95096 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.16□□□□□ -1.58
NKX2-2O95096 BMS1P17-202ENST00000416720 316 ntBASIC5.16□□□□□ -1.58
NKX2-2O95096 IPPKP1-201ENST00000422501 768 ntBASIC5.16□□□□□ -1.58
NKX2-2O95096 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.16□□□□□ -1.58
NKX2-2O95096 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.16□□□□□ -1.58
NKX2-2O95096 MRPL50P1-201ENST00000431951 384 ntBASIC5.16□□□□□ -1.58
NKX2-2O95096 GAPDHP34-201ENST00000432112 823 ntBASIC5.16□□□□□ -1.58
NKX2-2O95096 SUMO2P3-201ENST00000438311 288 ntBASIC5.16□□□□□ -1.58
NKX2-2O95096 AL138899.2-201ENST00000439139 499 ntBASIC5.16□□□□□ -1.58
NKX2-2O95096 RPS10P18-201ENST00000442662 495 ntBASIC5.16□□□□□ -1.58
NKX2-2O95096 RNF2P1-201ENST00000442955 1010 ntBASIC5.16□□□□□ -1.58
NKX2-2O95096 AC023271.1-201ENST00000445936 1090 ntBASIC5.16□□□□□ -1.58
NKX2-2O95096 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
NKX2-2O95096 RPL7P55-201ENST00000450522 746 ntBASIC5.16□□□□□ -1.58
NKX2-2O95096 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.16□□□□□ -1.58
NKX2-2O95096 PSAT1P4-201ENST00000466500 526 ntBASIC5.16□□□□□ -1.58
NKX2-2O95096 AC021205.1-201ENST00000468797 348 ntBASIC5.16□□□□□ -1.58
NKX2-2O95096 AC007998.1-201ENST00000474156 672 ntBASIC5.16□□□□□ -1.58
NKX2-2O95096 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.16□□□□□ -1.58
NKX2-2O95096 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.16□□□□□ -1.58
NKX2-2O95096 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.16□□□□□ -1.58
NKX2-2O95096 MTCO3P27-201ENST00000514397 196 ntBASIC5.16□□□□□ -1.58
NKX2-2O95096 MTATP6P9-201ENST00000515039 680 ntBASIC5.16□□□□□ -1.58
NKX2-2O95096 HIGD1AP18-201ENST00000520730 278 ntBASIC5.16□□□□□ -1.58
NKX2-2O95096 AC013701.1-201ENST00000522657 465 ntBASIC5.16□□□□□ -1.58
NKX2-2O95096 AP004609.2-201ENST00000532177 190 ntBASIC5.16□□□□□ -1.58
NKX2-2O95096 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-2O95096 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.16□□□□□ -1.58
NKX2-2O95096 AC009237.13-201ENST00000603193 276 ntBASIC5.16□□□□□ -1.58
NKX2-2O95096 AL139124.1-201ENST00000609123 421 ntBASIC5.16□□□□□ -1.58
NKX2-2O95096 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.16□□□□□ -1.58
NKX2-2O95096 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.16□□□□□ -1.58
NKX2-2O95096 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-2O95096 AC005156.1-201ENST00000613371 573 ntBASIC5.16□□□□□ -1.58
NKX2-2O95096 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.16□□□□□ -1.58
NKX2-2O95096 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.16□□□□□ -1.58
NKX2-2O95096 AC008691.1-209ENST00000642094 814 ntBASIC5.16□□□□□ -1.58
NKX2-2O95096 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-2O95096 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-2O95096 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-2O95096 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-2O95096 AC008432.1-201ENST00000615912 1320 ntBASIC5.16□□□□□ -1.58
NKX2-2O95096 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-2O95096 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-2O95096 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-2O95096 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-2O95096 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.16□□□□□ -1.58
NKX2-2O95096 LINC02019-201ENST00000608605 2060 ntBASIC5.16□□□□□ -1.58
NKX2-2O95096 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
NKX2-2O95096 AC114786.1-201ENST00000512892 1415 ntBASIC5.15□□□□□ -1.58
NKX2-2O95096 AC007938.2-201ENST00000604666 2634 ntBASIC5.15□□□□□ -1.58
NKX2-2O95096 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
NKX2-2O95096 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
NKX2-2O95096 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.15□□□□□ -1.58
NKX2-2O95096 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
NKX2-2O95096 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.15□□□□□ -1.58
NKX2-2O95096 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
NKX2-2O95096 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
NKX2-2O95096 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
NKX2-2O95096 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
NKX2-2O95096 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.15□□□□□ -1.58
NKX2-2O95096 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.15□□□□□ -1.58
NKX2-2O95096 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
NKX2-2O95096 RNA5SP46-201ENST00000362370 120 ntBASIC5.15□□□□□ -1.59
NKX2-2O95096 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NKX2-2O95096 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.15□□□□□ -1.59
NKX2-2O95096 RPL7P56-201ENST00000429441 717 ntBASIC5.15□□□□□ -1.59
NKX2-2O95096 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.15□□□□□ -1.59
NKX2-2O95096 RPL23AP19-201ENST00000436229 369 ntBASIC5.15□□□□□ -1.59
NKX2-2O95096 AL096829.2-201ENST00000446582 742 ntBASIC5.15□□□□□ -1.59
NKX2-2O95096 IGBP1P3-201ENST00000447449 1000 ntBASIC5.15□□□□□ -1.59
NKX2-2O95096 HMGN1P5-201ENST00000448591 263 ntBASIC5.15□□□□□ -1.59
NKX2-2O95096 AL450023.1-201ENST00000450868 751 ntBASIC5.15□□□□□ -1.59
NKX2-2O95096 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NKX2-2O95096 CYCSP20-201ENST00000473154 315 ntBASIC5.15□□□□□ -1.59
NKX2-2O95096 RN7SL583P-201ENST00000475692 287 ntBASIC5.15□□□□□ -1.59
NKX2-2O95096 AC138866.2-201ENST00000508650 584 ntBASIC5.15□□□□□ -1.59
NKX2-2O95096 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.15□□□□□ -1.59
NKX2-2O95096 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms