Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 SDHDP6-201ENST00000414693 480 ntBASIC5.1□□□□□ -1.59
SSX4O60224 AC016769.2-201ENST00000414815 475 ntBASIC5.1□□□□□ -1.59
SSX4O60224 GTF3AP1-201ENST00000416942 1004 ntBASIC5.1□□□□□ -1.59
SSX4O60224 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.1□□□□□ -1.59
SSX4O60224 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SSX4O60224 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.1□□□□□ -1.59
SSX4O60224 CRIP1P1-201ENST00000427567 185 ntBASIC5.1□□□□□ -1.59
SSX4O60224 AC126120.1-201ENST00000431082 470 ntBASIC5.1□□□□□ -1.59
SSX4O60224 AC093716.1-201ENST00000435923 377 ntBASIC5.1□□□□□ -1.59
SSX4O60224 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC5.1□□□□□ -1.59
SSX4O60224 PA2G4P6-201ENST00000438325 1197 ntBASIC5.1□□□□□ -1.59
SSX4O60224 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.1□□□□□ -1.59
SSX4O60224 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.1□□□□□ -1.59
SSX4O60224 SUMO2P1-206ENST00000445436 284 ntBASIC5.1□□□□□ -1.59
SSX4O60224 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.1□□□□□ -1.59
SSX4O60224 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.1□□□□□ -1.59
SSX4O60224 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.1□□□□□ -1.59
SSX4O60224 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.1□□□□□ -1.59
SSX4O60224 RN7SL72P-201ENST00000460697 269 ntBASIC5.1□□□□□ -1.59
SSX4O60224 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.1□□□□□ -1.59
SSX4O60224 RPL23AP40-201ENST00000487630 390 ntBASIC5.1□□□□□ -1.59
SSX4O60224 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SSX4O60224 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.1□□□□□ -1.59
SSX4O60224 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.1□□□□□ -1.59
SSX4O60224 AC106806.2-201ENST00000509365 500 ntBASIC5.1□□□□□ -1.59
SSX4O60224 BTG4P1-201ENST00000510421 183 ntBASIC5.1□□□□□ -1.59
SSX4O60224 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.1□□□□□ -1.59
SSX4O60224 RNU6-1102P-201ENST00000516149 96 ntBASIC5.1□□□□□ -1.59
SSX4O60224 FTH1P11-201ENST00000517577 551 ntBASIC5.1□□□□□ -1.59
SSX4O60224 TMEM97P2-201ENST00000517841 403 ntBASIC5.1□□□□□ -1.59
SSX4O60224 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.1□□□□□ -1.59
SSX4O60224 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.1□□□□□ -1.59
SSX4O60224 GVINP1-202ENST00000531871 7271 ntBASIC5.1□□□□□ -1.59
SSX4O60224 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SSX4O60224 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.1□□□□□ -1.59
SSX4O60224 AC091078.2-201ENST00000557145 559 ntBASIC5.1□□□□□ -1.59
SSX4O60224 AC007346.2-201ENST00000564816 892 ntBASIC5.1□□□□□ -1.59
SSX4O60224 AC079148.1-201ENST00000565944 819 ntBASIC5.1□□□□□ -1.59
SSX4O60224 AC233266.2-201ENST00000567067 528 ntBASIC5.1□□□□□ -1.59
SSX4O60224 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SSX4O60224 PPATP2-201ENST00000605635 508 ntBASIC5.1□□□□□ -1.59
SSX4O60224 AC015849.2-201ENST00000605738 409 ntBASIC5.1□□□□□ -1.59
SSX4O60224 AL021918.2-201ENST00000613415 194 ntBASIC5.1□□□□□ -1.59
SSX4O60224 AC096861.1-201ENST00000616652 240 ntBASIC5.1□□□□□ -1.59
SSX4O60224 AC253576.2-201ENST00000618815 580 ntBASIC5.1□□□□□ -1.59
SSX4O60224 AC021766.1-201ENST00000624404 741 ntBASIC5.1□□□□□ -1.59
SSX4O60224 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.1□□□□□ -1.59
SSX4O60224 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.1□□□□□ -1.59
SSX4O60224 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SSX4O60224 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
SSX4O60224 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
SSX4O60224 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SSX4O60224 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
SSX4O60224 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.1□□□□□ -1.59
SSX4O60224 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
SSX4O60224 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SSX4O60224 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SSX4O60224 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SSX4O60224 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
SSX4O60224 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SSX4O60224 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
SSX4O60224 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.09□□□□□ -1.59
SSX4O60224 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SSX4O60224 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SSX4O60224 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.09□□□□□ -1.59
SSX4O60224 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
SSX4O60224 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
SSX4O60224 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SSX4O60224 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.09□□□□□ -1.59
SSX4O60224 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.09□□□□□ -1.59
SSX4O60224 RNU6-31P-201ENST00000384388 108 ntBASIC5.09□□□□□ -1.59
SSX4O60224 MIR137-201ENST00000385223 102 ntBASIC5.09□□□□□ -1.59
SSX4O60224 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SSX4O60224 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
SSX4O60224 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.09□□□□□ -1.59
SSX4O60224 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.09□□□□□ -1.59
SSX4O60224 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.09□□□□□ -1.59
SSX4O60224 AL121882.1-201ENST00000422893 417 ntBASIC5.09□□□□□ -1.59
SSX4O60224 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.09□□□□□ -1.59
SSX4O60224 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.09□□□□□ -1.59
SSX4O60224 ELOCP3-201ENST00000439303 348 ntBASIC5.09□□□□□ -1.59
SSX4O60224 AL359265.1-201ENST00000440296 795 ntBASIC5.09□□□□□ -1.59
SSX4O60224 RPL23AP60-201ENST00000450011 454 ntBASIC5.09□□□□□ -1.59
SSX4O60224 SDC4P-201ENST00000453285 601 ntBASIC5.09□□□□□ -1.59
SSX4O60224 RN7SL269P-201ENST00000467795 305 ntBASIC5.09□□□□□ -1.59
SSX4O60224 RPL38P3-201ENST00000484463 213 ntBASIC5.09□□□□□ -1.59
SSX4O60224 RPL23AP73-201ENST00000492507 471 ntBASIC5.09□□□□□ -1.59
SSX4O60224 SUMO1P1-201ENST00000497904 306 ntBASIC5.09□□□□□ -1.59
SSX4O60224 AC109481.1-201ENST00000509173 282 ntBASIC5.09□□□□□ -1.59
SSX4O60224 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.09□□□□□ -1.59
SSX4O60224 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5.09□□□□□ -1.59
SSX4O60224 SNORA70.20-201ENST00000516848 126 ntBASIC5.09□□□□□ -1.59
SSX4O60224 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.09□□□□□ -1.59
SSX4O60224 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.09□□□□□ -1.59
SSX4O60224 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.09□□□□□ -1.59
SSX4O60224 AC087888.1-201ENST00000550884 1254 ntBASIC5.09□□□□□ -1.59
SSX4O60224 AC022404.1-201ENST00000555320 273 ntBASIC5.09□□□□□ -1.59
SSX4O60224 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.09□□□□□ -1.59
SSX4O60224 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SSX4O60224 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms