Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 Z68694.1-201ENST00000413929 841 ntBASIC5.56□□□□□ -1.52
SMAD6O43541 AL354868.1-201ENST00000417077 482 ntBASIC5.56□□□□□ -1.52
SMAD6O43541 SRSF1P1-201ENST00000424058 520 ntBASIC5.56□□□□□ -1.52
SMAD6O43541 RPL7P56-201ENST00000429441 717 ntBASIC5.56□□□□□ -1.52
SMAD6O43541 RPL7L1P9-201ENST00000431298 745 ntBASIC5.56□□□□□ -1.52
SMAD6O43541 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.56□□□□□ -1.52
SMAD6O43541 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.56□□□□□ -1.52
SMAD6O43541 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.56□□□□□ -1.52
SMAD6O43541 AC105399.1-202ENST00000447303 205 ntBASIC5.56□□□□□ -1.52
SMAD6O43541 RPS4XP14-201ENST00000493072 781 ntBASIC5.56□□□□□ -1.52
SMAD6O43541 RPEP1-201ENST00000504507 658 ntBASIC5.56□□□□□ -1.52
SMAD6O43541 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.56□□□□□ -1.52
SMAD6O43541 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.56□□□□□ -1.52
SMAD6O43541 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.56□□□□□ -1.52
SMAD6O43541 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.56□□□□□ -1.52
SMAD6O43541 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC5.56□□□□□ -1.52
SMAD6O43541 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.56□□□□□ -1.52
SMAD6O43541 AC126177.5-201ENST00000549599 178 ntBASIC5.56□□□□□ -1.52
SMAD6O43541 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.56□□□□□ -1.52
SMAD6O43541 LINC00557-201ENST00000563184 1279 ntBASIC5.56□□□□□ -1.52
SMAD6O43541 RBM22P1-201ENST00000578589 1214 ntBASIC5.56□□□□□ -1.52
SMAD6O43541 MIR1269B-201ENST00000580405 75 ntBASIC5.56□□□□□ -1.52
SMAD6O43541 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.56□□□□□ -1.52
SMAD6O43541 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.56□□□□□ -1.52
SMAD6O43541 QTRT1P1-201ENST00000604344 1078 ntBASIC5.56□□□□□ -1.52
SMAD6O43541 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.56□□□□□ -1.52
SMAD6O43541 AC020763.5-201ENST00000623298 430 ntBASIC5.56□□□□□ -1.52
SMAD6O43541 AL109659.3-201ENST00000624985 950 ntBASIC5.56□□□□□ -1.52
SMAD6O43541 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SMAD6O43541 CASC19-264ENST00000641912 1184 ntBASIC5.56□□□□□ -1.52
SMAD6O43541 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SMAD6O43541 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SMAD6O43541 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.56□□□□□ -1.52
SMAD6O43541 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.56□□□□□ -1.52
SMAD6O43541 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SMAD6O43541 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SMAD6O43541 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.56□□□□□ -1.52
SMAD6O43541 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SMAD6O43541 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SMAD6O43541 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SMAD6O43541 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.56□□□□□ -1.52
SMAD6O43541 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.56□□□□□ -1.52
SMAD6O43541 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
SMAD6O43541 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.56□□□□□ -1.52
SMAD6O43541 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SMAD6O43541 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SMAD6O43541 AC004076.2-201ENST00000620532 3323 ntBASIC5.55□□□□□ -1.52
SMAD6O43541 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SMAD6O43541 AP001002.1-201ENST00000625148 1513 ntBASIC5.55□□□□□ -1.52
SMAD6O43541 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.55□□□□□ -1.52
SMAD6O43541 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.55□□□□□ -1.52
SMAD6O43541 AL133388.1-201ENST00000404509 287 ntBASIC5.55□□□□□ -1.52
SMAD6O43541 OR4K12P-201ENST00000406538 961 ntBASIC5.55□□□□□ -1.52
SMAD6O43541 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SMAD6O43541 AL355433.1-201ENST00000422804 300 ntBASIC5.55□□□□□ -1.52
SMAD6O43541 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.55□□□□□ -1.52
SMAD6O43541 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.55□□□□□ -1.52
SMAD6O43541 SNRPFP2-201ENST00000440710 251 ntBASIC5.55□□□□□ -1.52
SMAD6O43541 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.55□□□□□ -1.52
SMAD6O43541 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.55□□□□□ -1.52
SMAD6O43541 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.55□□□□□ -1.52
SMAD6O43541 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC5.55□□□□□ -1.52
SMAD6O43541 AL139824.2-201ENST00000458731 1095 ntBASIC5.55□□□□□ -1.52
SMAD6O43541 COPS8P2-201ENST00000473228 627 ntBASIC5.55□□□□□ -1.52
SMAD6O43541 GTF2IP9-201ENST00000502460 301 ntBASIC5.55□□□□□ -1.52
SMAD6O43541 PGAM1P13-201ENST00000507497 754 ntBASIC5.55□□□□□ -1.52
SMAD6O43541 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.55□□□□□ -1.52
SMAD6O43541 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.55□□□□□ -1.52
SMAD6O43541 AC034244.2-201ENST00000514668 858 ntBASIC5.55□□□□□ -1.52
SMAD6O43541 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.55□□□□□ -1.52
SMAD6O43541 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.55□□□□□ -1.52
SMAD6O43541 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.55□□□□□ -1.52
SMAD6O43541 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SMAD6O43541 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC5.55□□□□□ -1.52
SMAD6O43541 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.55□□□□□ -1.52
SMAD6O43541 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
SMAD6O43541 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.55□□□□□ -1.52
SMAD6O43541 AP000769.2-201ENST00000602344 396 ntBASIC5.55□□□□□ -1.52
SMAD6O43541 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.55□□□□□ -1.52
SMAD6O43541 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.55□□□□□ -1.52
SMAD6O43541 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.55□□□□□ -1.52
SMAD6O43541 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.55□□□□□ -1.52
SMAD6O43541 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC5.55□□□□□ -1.52
SMAD6O43541 CU459211.1-201ENST00000635667 749 ntBASIC5.55□□□□□ -1.52
SMAD6O43541 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.55□□□□□ -1.52
SMAD6O43541 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.55□□□□□ -1.52
SMAD6O43541 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SMAD6O43541 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
SMAD6O43541 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SMAD6O43541 SAMMSON-213ENST00000641336 1521 ntBASIC5.54□□□□□ -1.52
SMAD6O43541 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.54□□□□□ -1.52
SMAD6O43541 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SMAD6O43541 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SMAD6O43541 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SMAD6O43541 AC093671.1-201ENST00000624981 2929 ntBASIC5.54□□□□□ -1.52
SMAD6O43541 CR788268.1-201ENST00000603931 1809 ntBASIC5.54□□□□□ -1.52
SMAD6O43541 RNA5SP183-201ENST00000362452 119 ntBASIC5.54□□□□□ -1.52
SMAD6O43541 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SMAD6O43541 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.54□□□□□ -1.52
SMAD6O43541 RPS3AP25-201ENST00000411660 793 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms