Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 MT-RNR1-201ENST00000389680 954 ntBASIC5.5□□□□□ -1.53
CCDC188H7C350 SNORD65-201ENST00000391079 73 ntBASIC5.5□□□□□ -1.53
CCDC188H7C350 VN1R12P-201ENST00000403778 876 ntBASIC5.5□□□□□ -1.53
CCDC188H7C350 AC245060.4-201ENST00000413293 1121 ntBASIC5.5□□□□□ -1.53
CCDC188H7C350 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC188H7C350 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.5□□□□□ -1.53
CCDC188H7C350 RPL35AP21-201ENST00000437667 333 ntBASIC5.5□□□□□ -1.53
CCDC188H7C350 GAPDHP25-201ENST00000447061 1001 ntBASIC5.5□□□□□ -1.53
CCDC188H7C350 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC188H7C350 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC188H7C350 LRRC37A14P-201ENST00000452297 462 ntBASIC5.5□□□□□ -1.53
CCDC188H7C350 LDHBP2-201ENST00000456969 1005 ntBASIC5.5□□□□□ -1.53
CCDC188H7C350 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.5□□□□□ -1.53
CCDC188H7C350 RN7SL423P-201ENST00000486202 304 ntBASIC5.5□□□□□ -1.53
CCDC188H7C350 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.5□□□□□ -1.53
CCDC188H7C350 PSMA2P2-201ENST00000504319 686 ntBASIC5.5□□□□□ -1.53
CCDC188H7C350 AC105031.1-201ENST00000518550 476 ntBASIC5.5□□□□□ -1.53
CCDC188H7C350 NRBF2P4-201ENST00000520874 850 ntBASIC5.5□□□□□ -1.53
CCDC188H7C350 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC188H7C350 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.5□□□□□ -1.53
CCDC188H7C350 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC188H7C350 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC188H7C350 AP004607.2-201ENST00000533949 322 ntBASIC5.5□□□□□ -1.53
CCDC188H7C350 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
CCDC188H7C350 BNIP3P1-201ENST00000547295 580 ntBASIC5.5□□□□□ -1.53
CCDC188H7C350 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.5□□□□□ -1.53
CCDC188H7C350 AC092121.1-201ENST00000569452 202 ntBASIC5.5□□□□□ -1.53
CCDC188H7C350 AP001496.3-201ENST00000580230 913 ntBASIC5.5□□□□□ -1.53
CCDC188H7C350 MIR4310-201ENST00000582950 57 ntBASIC5.5□□□□□ -1.53
CCDC188H7C350 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.5□□□□□ -1.53
CCDC188H7C350 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC188H7C350 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC188H7C350 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC188H7C350 AC005252.1-201ENST00000604518 1063 ntBASIC5.5□□□□□ -1.53
CCDC188H7C350 MIR7109-201ENST00000613748 65 ntBASIC5.5□□□□□ -1.53
CCDC188H7C350 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.5□□□□□ -1.53
CCDC188H7C350 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.5□□□□□ -1.53
CCDC188H7C350 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC188H7C350 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CCDC188H7C350 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC188H7C350 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC188H7C350 TCP1P3-201ENST00000414406 1498 ntBASIC5.5□□□□□ -1.53
CCDC188H7C350 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.5□□□□□ -1.53
CCDC188H7C350 AL138820.1-201ENST00000617901 5305 ntBASIC5.5□□□□□ -1.53
CCDC188H7C350 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC188H7C350 AL022393.1-201ENST00000625142 1677 ntBASIC5.5□□□□□ -1.53
CCDC188H7C350 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.5□□□□□ -1.53
CCDC188H7C350 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC188H7C350 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC188H7C350 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.49□□□□□ -1.53
CCDC188H7C350 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC188H7C350 YES1P1-201ENST00000418510 1628 ntBASIC5.49□□□□□ -1.53
CCDC188H7C350 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC188H7C350 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC188H7C350 RNU4-2-201ENST00000365668 141 ntBASIC5.49□□□□□ -1.53
CCDC188H7C350 GAPDHP15-201ENST00000398586 975 ntBASIC5.49□□□□□ -1.53
CCDC188H7C350 AL589655.1-201ENST00000405398 482 ntBASIC5.49□□□□□ -1.53
CCDC188H7C350 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC188H7C350 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC188H7C350 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC188H7C350 AC009238.2-201ENST00000431026 355 ntBASIC5.49□□□□□ -1.53
CCDC188H7C350 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC188H7C350 NDUFA5P1-201ENST00000433858 341 ntBASIC5.49□□□□□ -1.53
CCDC188H7C350 AL161722.2-201ENST00000434731 981 ntBASIC5.49□□□□□ -1.53
CCDC188H7C350 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC188H7C350 MRPL35P2-201ENST00000448009 511 ntBASIC5.49□□□□□ -1.53
CCDC188H7C350 BTF3P6-201ENST00000448054 499 ntBASIC5.49□□□□□ -1.53
CCDC188H7C350 RN7SL189P-201ENST00000468631 289 ntBASIC5.49□□□□□ -1.53
CCDC188H7C350 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
CCDC188H7C350 HMGB1P47-201ENST00000511281 589 ntBASIC5.49□□□□□ -1.53
CCDC188H7C350 AC006427.1-201ENST00000514359 712 ntBASIC5.49□□□□□ -1.53
CCDC188H7C350 SNORA43.3-201ENST00000517240 103 ntBASIC5.49□□□□□ -1.53
CCDC188H7C350 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC188H7C350 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.49□□□□□ -1.53
CCDC188H7C350 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.49□□□□□ -1.53
CCDC188H7C350 AC068305.2-201ENST00000550567 1205 ntBASIC5.49□□□□□ -1.53
CCDC188H7C350 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
CCDC188H7C350 AC026826.3-201ENST00000561747 158 ntBASIC5.49□□□□□ -1.53
CCDC188H7C350 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC188H7C350 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC188H7C350 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC188H7C350 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC188H7C350 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC188H7C350 AL359091.2-201ENST00000609303 556 ntBASIC5.49□□□□□ -1.53
CCDC188H7C350 AC004241.3-201ENST00000611728 517 ntBASIC5.49□□□□□ -1.53
CCDC188H7C350 AC015914.2-201ENST00000618167 288 ntBASIC5.49□□□□□ -1.53
CCDC188H7C350 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.49□□□□□ -1.53
CCDC188H7C350 AL118508.4-201ENST00000624142 1176 ntBASIC5.49□□□□□ -1.53
CCDC188H7C350 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CCDC188H7C350 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC188H7C350 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC188H7C350 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC188H7C350 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC188H7C350 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC188H7C350 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC188H7C350 AL672167.1-204ENST00000641875 3017 ntBASIC5.49□□□□□ -1.53
CCDC188H7C350 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CCDC188H7C350 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CCDC188H7C350 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC188H7C350 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms