Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 CETN2-201ENST00000370277 1454 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 TUBBP10-201ENST00000427668 1301 ntBASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 AC007529.1-201ENST00000418574 2178 ntBASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 SNORA7A-201ENST00000384765 139 ntBASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 AL035079.1-201ENST00000405210 287 ntBASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 GAPDHP42-201ENST00000406848 981 ntBASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 RN7SKP16-201ENST00000410180 299 ntBASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 RNA5SP239-201ENST00000410218 129 ntBASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 RNA5SP39-201ENST00000411245 120 ntBASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 RPSAP35-201ENST00000413753 818 ntBASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 AC002127.1-201ENST00000421305 225 ntBASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 DYNLL1P7-201ENST00000429273 258 ntBASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 AC124944.2-201ENST00000429866 1242 ntBASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 NIP7P1-201ENST00000433227 512 ntBASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 PPIAP13-201ENST00000434706 478 ntBASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 MYO5BP2-201ENST00000449815 1277 ntBASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 RHEBP2-201ENST00000450289 600 ntBASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 AC243772.1-201ENST00000451620 410 ntBASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 AC117382.1-201ENST00000468074 730 ntBASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 AC007998.1-201ENST00000474156 672 ntBASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 AC117383.2-201ENST00000514722 322 ntBASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 AC100849.2-201ENST00000518324 519 ntTSL 2 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 OR4C1P-201ENST00000530880 937 ntBASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 AP006289.1-201ENST00000538089 277 ntBASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 NDUFB4P11-201ENST00000560510 395 ntBASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 RN7SL25P-201ENST00000583862 260 ntBASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 AC020914.4-201ENST00000597690 277 ntBASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 IMMP1LP1-201ENST00000605170 488 ntBASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 IGLCOR22-2-201ENST00000605398 313 ntBASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 AL159169.2-201ENST00000610061 1269 ntBASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 MIR4727-201ENST00000622232 55 ntBASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 AC004232.3-201ENST00000622977 525 ntBASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 AC005086.4-201ENST00000623065 213 ntBASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 AC095050.2-201ENST00000510748 1458 ntBASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 AL592437.2-201ENST00000421655 2434 ntBASIC2.76□□□□□ -1.97
CHKB-CPT1BH3BT56 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms