Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC6.67□□□□□ -1.34
COL4A3BPQ9Y5P4 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.67□□□□□ -1.34
COL4A3BPQ9Y5P4 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.67□□□□□ -1.34
COL4A3BPQ9Y5P4 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.67□□□□□ -1.34
COL4A3BPQ9Y5P4 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.67□□□□□ -1.34
COL4A3BPQ9Y5P4 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC6.67□□□□□ -1.34
COL4A3BPQ9Y5P4 MORF4L1P3-201ENST00000525966 950 ntBASIC6.67□□□□□ -1.34
COL4A3BPQ9Y5P4 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.67□□□□□ -1.34
COL4A3BPQ9Y5P4 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.67□□□□□ -1.34
COL4A3BPQ9Y5P4 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.67□□□□□ -1.34
COL4A3BPQ9Y5P4 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.67□□□□□ -1.34
COL4A3BPQ9Y5P4 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.67□□□□□ -1.34
COL4A3BPQ9Y5P4 SULT1C2P2-201ENST00000562517 294 ntBASIC6.67□□□□□ -1.34
COL4A3BPQ9Y5P4 MTND1P8-201ENST00000571424 950 ntBASIC6.67□□□□□ -1.34
COL4A3BPQ9Y5P4 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.67□□□□□ -1.34
COL4A3BPQ9Y5P4 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC6.67□□□□□ -1.34
COL4A3BPQ9Y5P4 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC6.67□□□□□ -1.34
COL4A3BPQ9Y5P4 AC125494.2-201ENST00000602431 657 ntBASIC6.67□□□□□ -1.34
COL4A3BPQ9Y5P4 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC6.67□□□□□ -1.34
COL4A3BPQ9Y5P4 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.67□□□□□ -1.34
COL4A3BPQ9Y5P4 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
COL4A3BPQ9Y5P4 THAP12P9-201ENST00000503971 2360 ntBASIC6.67□□□□□ -1.34
COL4A3BPQ9Y5P4 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC6.67□□□□□ -1.34
COL4A3BPQ9Y5P4 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.67□□□□□ -1.34
COL4A3BPQ9Y5P4 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.67□□□□□ -1.34
COL4A3BPQ9Y5P4 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.67□□□□□ -1.34
COL4A3BPQ9Y5P4 AC012254.3-201ENST00000591183 2117 ntBASIC6.67□□□□□ -1.34
COL4A3BPQ9Y5P4 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL4A3BPQ9Y5P4 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
COL4A3BPQ9Y5P4 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 ENSAP3-201ENST00000312710 333 ntBASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 ZNF602P-201ENST00000405929 924 ntBASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 AL354890.1-201ENST00000413730 346 ntBASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 TRGV6-201ENST00000417928 299 ntBASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 RPS24P8-201ENST00000431490 402 ntBASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 VN1R110P-201ENST00000438988 971 ntBASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 ARL5AP2-201ENST00000444698 533 ntBASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 ACA64.4-201ENST00000459070 127 ntBASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 RN7SL269P-201ENST00000467795 305 ntBASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 AC010460.2-201ENST00000509054 677 ntBASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 AC114781.3-201ENST00000512083 142 ntBASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 RNA5SP271-201ENST00000516700 88 ntBASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 AL049779.3-201ENST00000557141 606 ntBASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 ZNF971P-201ENST00000562068 1249 ntBASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.66□□□□□ -1.34
COL4A3BPQ9Y5P4 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
COL4A3BPQ9Y5P4 GTF2IP4-201ENST00000453092 2054 ntBASIC6.65□□□□□ -1.34
COL4A3BPQ9Y5P4 ZNF402P-201ENST00000404435 3100 ntBASIC6.65□□□□□ -1.34
COL4A3BPQ9Y5P4 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
COL4A3BPQ9Y5P4 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.65□□□□□ -1.34
COL4A3BPQ9Y5P4 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.65□□□□□ -1.34
COL4A3BPQ9Y5P4 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.65□□□□□ -1.34
COL4A3BPQ9Y5P4 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC6.65□□□□□ -1.34
COL4A3BPQ9Y5P4 SNORD1C-201ENST00000363315 78 ntBASIC6.65□□□□□ -1.34
COL4A3BPQ9Y5P4 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
COL4A3BPQ9Y5P4 SNRPEP6-201ENST00000407465 277 ntBASIC6.65□□□□□ -1.34
COL4A3BPQ9Y5P4 BX284632.2-201ENST00000421091 399 ntBASIC6.65□□□□□ -1.34
COL4A3BPQ9Y5P4 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
COL4A3BPQ9Y5P4 NDUFS5P5-201ENST00000437256 321 ntBASIC6.65□□□□□ -1.34
COL4A3BPQ9Y5P4 BX679664.2-201ENST00000439282 283 ntBASIC6.65□□□□□ -1.34
COL4A3BPQ9Y5P4 AL512605.1-202ENST00000441919 381 ntBASIC6.65□□□□□ -1.34
COL4A3BPQ9Y5P4 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.65□□□□□ -1.34
COL4A3BPQ9Y5P4 AL359955.2-201ENST00000445380 353 ntBASIC6.65□□□□□ -1.34
COL4A3BPQ9Y5P4 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL4A3BPQ9Y5P4 TRY2P-201ENST00000448860 689 ntBASIC6.65□□□□□ -1.34
COL4A3BPQ9Y5P4 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC6.65□□□□□ -1.34
COL4A3BPQ9Y5P4 OR51B8P-201ENST00000449892 769 ntBASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms