Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 SNORA70.9-201ENST00000384370 135 ntBASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 AC092648.1-201ENST00000425870 423 ntBASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 AL662874.1-201ENST00000426065 230 ntBASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 ZNF965P-201ENST00000432501 817 ntBASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 AL138787.1-202ENST00000437804 898 ntBASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 RPS4XP14-201ENST00000493072 781 ntBASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 RN7SL466P-201ENST00000497546 295 ntBASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 AC020699.1-201ENST00000505161 445 ntBASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 AC112673.1-201ENST00000513168 575 ntBASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 ATP5LP3-201ENST00000514223 304 ntBASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 RNU5A-7P-201ENST00000515979 116 ntBASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 IGLV3-30-201ENST00000524362 298 ntBASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 AL109741.3-201ENST00000561748 592 ntBASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 AC007448.1-201ENST00000582714 234 ntBASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 AC008115.3-201ENST00000614874 549 ntBASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 AC079395.3-201ENST00000615161 484 ntBASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 HSPD1P14-201ENST00000432666 1618 ntBASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 AC133552.1-201ENST00000569988 4007 ntBASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 AL360270.2-201ENST00000562952 5985 ntBASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 MIR137-201ENST00000385223 102 ntBASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 MTCO2P21-201ENST00000419780 677 ntBASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 ZNF885P-201ENST00000420174 1098 ntBASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 TNPO1P1-201ENST00000423641 1138 ntBASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 RPL12P28-201ENST00000430852 489 ntBASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 GAPDHP48-201ENST00000436626 961 ntBASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 RN7SL284P-201ENST00000498823 275 ntBASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 MTCYBP35-201ENST00000503630 1137 ntBASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 AC074087.1-201ENST00000512059 724 ntBASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 RNU6-889P-201ENST00000517189 103 ntBASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.73□□□□□ -1.33
CTDP1Q9Y5B0 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms