Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AL133445.1-201ENST00000467051 452 ntBASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 AC022336.1-201ENST00000475510 337 ntBASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 RN7SL547P-201ENST00000490793 290 ntBASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 RPSAP51-201ENST00000497462 645 ntBASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 SUGT1P3-202ENST00000604259 383 ntBASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 AL359513.1-201ENST00000614364 557 ntBASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 AC099654.6-201ENST00000636487 512 ntBASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 GVINP1-202ENST00000531871 7271 ntBASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
ATG4BQ9Y4P1 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 MRRFP1-201ENST00000435941 1675 ntBASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 RNA5SP335-201ENST00000363817 110 ntBASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 RNU6-891P-201ENST00000384280 111 ntBASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 RN7SKP59-201ENST00000410520 314 ntBASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 MARK2P12-201ENST00000420129 585 ntBASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 DSTNP5-201ENST00000427921 523 ntBASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 RPS27AP6-201ENST00000427962 448 ntBASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 ARAFP2-201ENST00000440565 559 ntBASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 AC105918.1-201ENST00000474399 838 ntBASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 BX510359.5-201ENST00000515651 304 ntBASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 RBM22P1-201ENST00000578589 1214 ntBASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 RN7SL356P-201ENST00000582228 248 ntBASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 AC020915.5-201ENST00000596836 964 ntBASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 AC006363.1-201ENST00000603806 463 ntBASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
ATG4BQ9Y4P1 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
ATG4BQ9Y4P1 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.09□□□□□ -1.6
ATG4BQ9Y4P1 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.09□□□□□ -1.6
ATG4BQ9Y4P1 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
ATG4BQ9Y4P1 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
ATG4BQ9Y4P1 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
ATG4BQ9Y4P1 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.08□□□□□ -1.6
ATG4BQ9Y4P1 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
ATG4BQ9Y4P1 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ATG4BQ9Y4P1 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ATG4BQ9Y4P1 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
ATG4BQ9Y4P1 RARSP1-201ENST00000542842 1418 ntBASIC5.08□□□□□ -1.6
ATG4BQ9Y4P1 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.08□□□□□ -1.6
ATG4BQ9Y4P1 AL078621.3-201ENST00000623707 2042 ntBASIC5.08□□□□□ -1.6
ATG4BQ9Y4P1 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.08□□□□□ -1.6
ATG4BQ9Y4P1 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
ATG4BQ9Y4P1 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
ATG4BQ9Y4P1 RNU6-670P-201ENST00000364312 104 ntBASIC5.08□□□□□ -1.6
ATG4BQ9Y4P1 RNU1-77P-201ENST00000390868 162 ntBASIC5.08□□□□□ -1.6
ATG4BQ9Y4P1 GPS2P1-201ENST00000411761 986 ntBASIC5.08□□□□□ -1.6
ATG4BQ9Y4P1 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.08□□□□□ -1.6
ATG4BQ9Y4P1 RPS20P25-201ENST00000412447 352 ntBASIC5.08□□□□□ -1.6
ATG4BQ9Y4P1 TRIM60P17-201ENST00000415181 719 ntBASIC5.08□□□□□ -1.6
ATG4BQ9Y4P1 GTF3AP1-201ENST00000416942 1004 ntBASIC5.08□□□□□ -1.6
ATG4BQ9Y4P1 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.08□□□□□ -1.6
ATG4BQ9Y4P1 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ATG4BQ9Y4P1 HMGB3P10-201ENST00000434734 572 ntBASIC5.08□□□□□ -1.6
ATG4BQ9Y4P1 CYCSP12-201ENST00000437729 300 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms