Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AL034549.2-201ENST00000618285 3373 ntBASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 RNU6-697P-201ENST00000363348 107 ntBASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 RN7SKP28-201ENST00000364770 305 ntBASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 RNU4-2-201ENST00000365668 141 ntBASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 DBIP1-201ENST00000401435 260 ntBASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 RPL12P9-201ENST00000412942 488 ntBASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 OR6E1P-201ENST00000414424 923 ntBASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 AC064862.4-201ENST00000442180 334 ntBASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 AP000797.2-201ENST00000475768 606 ntBASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 ENPP7P11-201ENST00000505915 627 ntBASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 AC138866.2-201ENST00000508650 584 ntBASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 RNU4-18P-201ENST00000516751 149 ntBASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 CDC42P3-201ENST00000518493 633 ntBASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 AC106730.2-201ENST00000566641 540 ntBASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 AC012616.1-201ENST00000600294 197 ntBASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 AC023813.4-201ENST00000607580 580 ntBASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 AC244107.2-201ENST00000611773 76 ntBASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 AL354950.1-201ENST00000614150 568 ntBASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RHBDD3Q9Y3P4 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 AC004817.4-201ENST00000602396 3625 ntBASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 Y_RNA.62-201ENST00000362840 99 ntBASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 RNA5SP122-201ENST00000384457 108 ntBASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 RAB5CP1-201ENST00000395972 580 ntBASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 AL358178.1-201ENST00000407698 397 ntBASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 AL596448.1-201ENST00000415024 392 ntBASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 BMS1P17-202ENST00000416720 316 ntBASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 DSTNP5-201ENST00000427921 523 ntBASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 RPL19P16-201ENST00000433839 588 ntBASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 RPL23AP19-201ENST00000436229 369 ntBASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 AC002504.1-201ENST00000438281 691 ntBASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 AC019185.1-201ENST00000442718 389 ntBASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 RN7SL515P-201ENST00000463999 297 ntBASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 AC021660.1-201ENST00000465006 554 ntBASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 AC112191.2-201ENST00000522428 333 ntBASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 NMNAT1P5-201ENST00000559657 841 ntBASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 AC010547.6-201ENST00000571789 193 ntBASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 MIR4505-201ENST00000582238 73 ntBASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 AL118522.2-201ENST00000616045 615 ntBASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 CU639417.4-201ENST00000623928 207 ntBASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 AC007683.2-201ENST00000624681 714 ntBASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 AL450345.1-202ENST00000605741 3881 ntBASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.69□□□□□ -1.66
RHBDD3Q9Y3P4 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms