Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 YWHAZP6-201ENST00000399764 738 ntBASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 HMGB3P7-201ENST00000400214 611 ntBASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 RN7SKP38-201ENST00000410782 309 ntBASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 TRIM60P17-201ENST00000415181 719 ntBASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 AC124944.2-201ENST00000429866 1242 ntBASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 AC006335.2-201ENST00000437993 330 ntBASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 Z84478.1-201ENST00000438230 1219 ntBASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 RPL31P53-201ENST00000457065 348 ntBASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 AC011225.1-201ENST00000457751 369 ntBASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 RPSAP37-201ENST00000470913 821 ntBASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 OR9N1P-201ENST00000491296 333 ntBASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 AC122714.1-201ENST00000502510 459 ntBASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 ARL4AP1-201ENST00000503220 705 ntBASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 HSPE1P2-201ENST00000554777 306 ntBASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 AC018552.1-201ENST00000562099 811 ntBASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 MRPL45P2-203ENST00000573318 473 ntBASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 AC022884.2-201ENST00000578535 580 ntBASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 AC090774.2-201ENST00000584708 322 ntBASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 TEX41-218ENST00000596540 882 ntTSL 5 BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 AC092266.1-201ENST00000610958 165 ntBASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 MIR6839-201ENST00000620425 113 ntBASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 AC022919.1-201ENST00000624979 626 ntBASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 DLD-205ENST00000440410 1993 ntTSL 2 BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.47□□□□□ -1.69
KCNIP3Q9Y2W7 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
KCNIP3Q9Y2W7 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.46□□□□□ -1.69
KCNIP3Q9Y2W7 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
KCNIP3Q9Y2W7 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 AC104118.1-201ENST00000607625 1589 ntBASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 RN7SKP6-201ENST00000364795 319 ntBASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 MIR130B-202ENST00000385018 82 ntBASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 RN7SKP199-201ENST00000410325 305 ntBASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 LINC00328-2P-201ENST00000436585 219 ntBASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 GAPDHP58-201ENST00000438477 1006 ntBASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 DNAJB5P1-201ENST00000454004 806 ntBASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 HSPE1P22-201ENST00000456856 327 ntBASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 AC023194.2-201ENST00000465398 406 ntBASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 RPS3AP15-201ENST00000483874 781 ntBASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 AC090638.1-201ENST00000498296 909 ntBASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 AK4P6-201ENST00000505168 528 ntBASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 RNU6-319P-201ENST00000516025 108 ntBASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 RN7SKP238-201ENST00000516483 249 ntBASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 IGLV3-30-201ENST00000524362 298 ntBASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 OR8G3P-201ENST00000533406 921 ntBASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 TRAV11-201ENST00000539512 339 ntBASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 OR11H3P-201ENST00000554547 982 ntBASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 AL049874.4-201ENST00000557593 255 ntBASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.46□□□□□ -1.7
KCNIP3Q9Y2W7 AC122134.1-201ENST00000565664 1104 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 193.2 ms