Protein–RNA interactions for Protein: Q9UJD0

RIMS3, Regulating synaptic membrane exocytosis protein 3, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3Q9UJD0 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RIMS3Q9UJD0 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
RIMS3Q9UJD0 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RIMS3Q9UJD0 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RIMS3Q9UJD0 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.91□□□□□ -1.62
RIMS3Q9UJD0 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
RIMS3Q9UJD0 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RIMS3Q9UJD0 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
RIMS3Q9UJD0 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
RIMS3Q9UJD0 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.91□□□□□ -1.62
RIMS3Q9UJD0 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RIMS3Q9UJD0 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
RIMS3Q9UJD0 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.9□□□□□ -1.62
RIMS3Q9UJD0 OR13C1P-202ENST00000641378 2919 ntBASIC4.9□□□□□ -1.62
RIMS3Q9UJD0 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
RIMS3Q9UJD0 AL513548.1-201ENST00000562904 1724 ntBASIC4.9□□□□□ -1.62
RIMS3Q9UJD0 AC023490.2-201ENST00000359859 470 ntBASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 AL035079.1-201ENST00000405210 287 ntBASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 RN7SKP125-201ENST00000410481 302 ntBASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 HMGN1P20-201ENST00000411849 300 ntBASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 SLC20A1P1-201ENST00000413906 956 ntBASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 TMBIM7P-201ENST00000418074 855 ntBASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 AC013429.2-201ENST00000418798 781 ntBASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 SRSF1P1-201ENST00000424058 520 ntBASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 GSTM5P1-201ENST00000434751 660 ntBASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 NPM1P33-201ENST00000438918 872 ntBASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 AC079168.1-201ENST00000458741 345 ntBASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 AK6-203ENST00000502819 743 ntTSL 5 BASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 AC113398.2-201ENST00000507630 558 ntBASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 HMGB1P44-201ENST00000508597 572 ntBASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 ENPP7P9-201ENST00000514456 627 ntBASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 AC024405.1-201ENST00000532521 1042 ntBASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 AC025423.2-201ENST00000537570 439 ntBASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 AC078878.1-201ENST00000539832 958 ntBASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 SNORA35B-201ENST00000607417 129 ntBASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 SNORD91B-202ENST00000608459 222 ntBASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 AL139407.1-201ENST00000613826 1175 ntBASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 AL096712.1-201ENST00000614561 159 ntBASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 MIR6071-201ENST00000616741 78 ntBASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 AL929601.4-201ENST00000613011 1341 ntBASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.9□□□□□ -1.63
RIMS3Q9UJD0 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.89□□□□□ -1.63
RIMS3Q9UJD0 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RIMS3Q9UJD0 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RIMS3Q9UJD0 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RIMS3Q9UJD0 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RIMS3Q9UJD0 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RIMS3Q9UJD0 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.89□□□□□ -1.63
RIMS3Q9UJD0 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
RIMS3Q9UJD0 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RIMS3Q9UJD0 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
RIMS3Q9UJD0 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RIMS3Q9UJD0 OR6E1P-201ENST00000414424 923 ntBASIC4.89□□□□□ -1.63
RIMS3Q9UJD0 AL596448.1-201ENST00000415024 392 ntBASIC4.89□□□□□ -1.63
RIMS3Q9UJD0 Z93019.1-201ENST00000416450 973 ntBASIC4.89□□□□□ -1.63
RIMS3Q9UJD0 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RIMS3Q9UJD0 AL691447.1-201ENST00000419456 387 ntBASIC4.89□□□□□ -1.63
RIMS3Q9UJD0 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RIMS3Q9UJD0 AC009238.2-201ENST00000431026 355 ntBASIC4.89□□□□□ -1.63
RIMS3Q9UJD0 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.89□□□□□ -1.63
RIMS3Q9UJD0 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.89□□□□□ -1.63
RIMS3Q9UJD0 CYCSP34-201ENST00000458172 304 ntBASIC4.89□□□□□ -1.63
RIMS3Q9UJD0 AC020890.1-201ENST00000491837 504 ntBASIC4.89□□□□□ -1.63
RIMS3Q9UJD0 RN7SL591P-201ENST00000496150 292 ntBASIC4.89□□□□□ -1.63
RIMS3Q9UJD0 ARL4AP1-201ENST00000503220 705 ntBASIC4.89□□□□□ -1.63
RIMS3Q9UJD0 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.89□□□□□ -1.63
RIMS3Q9UJD0 AC138866.2-201ENST00000508650 584 ntBASIC4.89□□□□□ -1.63
RIMS3Q9UJD0 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.89□□□□□ -1.63
RIMS3Q9UJD0 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.89□□□□□ -1.63
RIMS3Q9UJD0 SNORD116-30-201ENST00000516468 85 ntBASIC4.89□□□□□ -1.63
RIMS3Q9UJD0 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.89□□□□□ -1.63
RIMS3Q9UJD0 IGKV2-4-201ENST00000523070 340 ntBASIC4.89□□□□□ -1.63
RIMS3Q9UJD0 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RIMS3Q9UJD0 AC005341.1-201ENST00000571086 708 ntBASIC4.89□□□□□ -1.63
RIMS3Q9UJD0 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.89□□□□□ -1.63
RIMS3Q9UJD0 AC134669.1-201ENST00000581275 672 ntBASIC4.89□□□□□ -1.63
RIMS3Q9UJD0 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC4.89□□□□□ -1.63
RIMS3Q9UJD0 AC008814.1-201ENST00000603797 406 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms