Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.96□□□□□ -1.46
DKK3Q9UBP4 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
DKK3Q9UBP4 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.96□□□□□ -1.46
DKK3Q9UBP4 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.96□□□□□ -1.46
DKK3Q9UBP4 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
DKK3Q9UBP4 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
DKK3Q9UBP4 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
DKK3Q9UBP4 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
DKK3Q9UBP4 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
DKK3Q9UBP4 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
DKK3Q9UBP4 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
DKK3Q9UBP4 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
DKK3Q9UBP4 CASC19-248ENST00000641674 1356 ntBASIC5.95□□□□□ -1.46
DKK3Q9UBP4 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.95□□□□□ -1.46
DKK3Q9UBP4 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
DKK3Q9UBP4 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
DKK3Q9UBP4 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
DKK3Q9UBP4 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
DKK3Q9UBP4 OR52B3P-201ENST00000314715 928 ntBASIC5.95□□□□□ -1.46
DKK3Q9UBP4 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
DKK3Q9UBP4 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.95□□□□□ -1.46
DKK3Q9UBP4 MIR365B-201ENST00000362317 111 ntBASIC5.95□□□□□ -1.46
DKK3Q9UBP4 RNU6-1331P-201ENST00000363658 106 ntBASIC5.95□□□□□ -1.46
DKK3Q9UBP4 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.95□□□□□ -1.46
DKK3Q9UBP4 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.95□□□□□ -1.46
DKK3Q9UBP4 RPS3AP2-201ENST00000407190 754 ntBASIC5.95□□□□□ -1.46
DKK3Q9UBP4 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
DKK3Q9UBP4 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.95□□□□□ -1.46
DKK3Q9UBP4 ARL2BPP3-201ENST00000421226 480 ntBASIC5.95□□□□□ -1.46
DKK3Q9UBP4 SOCS5P3-201ENST00000425115 1576 ntBASIC5.95□□□□□ -1.46
DKK3Q9UBP4 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.95□□□□□ -1.46
DKK3Q9UBP4 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.95□□□□□ -1.46
DKK3Q9UBP4 RPL23AP19-201ENST00000436229 369 ntBASIC5.95□□□□□ -1.46
DKK3Q9UBP4 NANOGP9-201ENST00000439890 892 ntBASIC5.95□□□□□ -1.46
DKK3Q9UBP4 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.95□□□□□ -1.46
DKK3Q9UBP4 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.95□□□□□ -1.46
DKK3Q9UBP4 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
DKK3Q9UBP4 AC069277.2-201ENST00000454211 432 ntBASIC5.95□□□□□ -1.46
DKK3Q9UBP4 AC110749.1-201ENST00000462007 357 ntBASIC5.95□□□□□ -1.46
DKK3Q9UBP4 AL355032.1-201ENST00000472981 438 ntBASIC5.95□□□□□ -1.46
DKK3Q9UBP4 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
DKK3Q9UBP4 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.95□□□□□ -1.46
DKK3Q9UBP4 AC093720.1-201ENST00000505681 714 ntBASIC5.95□□□□□ -1.46
DKK3Q9UBP4 AC069306.1-201ENST00000507006 843 ntBASIC5.95□□□□□ -1.46
DKK3Q9UBP4 MTATP6P1-201ENST00000514057 681 ntBASIC5.95□□□□□ -1.46
DKK3Q9UBP4 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.95□□□□□ -1.46
DKK3Q9UBP4 AC023538.1-201ENST00000534576 736 ntBASIC5.95□□□□□ -1.46
DKK3Q9UBP4 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.95□□□□□ -1.46
DKK3Q9UBP4 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.95□□□□□ -1.46
DKK3Q9UBP4 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
DKK3Q9UBP4 AL390334.1-201ENST00000556395 450 ntBASIC5.95□□□□□ -1.46
DKK3Q9UBP4 AC090888.2-201ENST00000559765 1144 ntBASIC5.95□□□□□ -1.46
DKK3Q9UBP4 AC092868.3-201ENST00000560515 784 ntBASIC5.95□□□□□ -1.46
DKK3Q9UBP4 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.95□□□□□ -1.46
DKK3Q9UBP4 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
DKK3Q9UBP4 VN1R87P-201ENST00000596706 487 ntBASIC5.95□□□□□ -1.46
DKK3Q9UBP4 AF230666.2-201ENST00000602328 725 ntBASIC5.95□□□□□ -1.46
DKK3Q9UBP4 AC114878.2-201ENST00000604863 1251 ntBASIC5.95□□□□□ -1.46
DKK3Q9UBP4 AC112503.1-201ENST00000608436 391 ntBASIC5.95□□□□□ -1.46
DKK3Q9UBP4 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.95□□□□□ -1.46
DKK3Q9UBP4 CYCSP41-201ENST00000616920 296 ntBASIC5.95□□□□□ -1.46
DKK3Q9UBP4 AC138965.3-201ENST00000623875 498 ntBASIC5.95□□□□□ -1.46
DKK3Q9UBP4 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.95□□□□□ -1.46
DKK3Q9UBP4 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.95□□□□□ -1.46
DKK3Q9UBP4 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.95□□□□□ -1.46
DKK3Q9UBP4 AL121768.1-201ENST00000613917 2544 ntBASIC5.95□□□□□ -1.46
DKK3Q9UBP4 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
DKK3Q9UBP4 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
DKK3Q9UBP4 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
DKK3Q9UBP4 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 RNA5SP500-201ENST00000364486 119 ntBASIC5.94□□□□□ -1.46
DKK3Q9UBP4 RNA5SP510-201ENST00000364697 99 ntBASIC5.94□□□□□ -1.46
DKK3Q9UBP4 AL121835.1-201ENST00000404250 354 ntBASIC5.94□□□□□ -1.46
DKK3Q9UBP4 RNA5SP296-201ENST00000410523 111 ntBASIC5.94□□□□□ -1.46
DKK3Q9UBP4 NIFKP3-201ENST00000417799 865 ntBASIC5.94□□□□□ -1.46
DKK3Q9UBP4 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 SETP6-201ENST00000479329 568 ntBASIC5.94□□□□□ -1.46
DKK3Q9UBP4 AC099521.1-201ENST00000482557 334 ntBASIC5.94□□□□□ -1.46
DKK3Q9UBP4 AC082651.2-201ENST00000496833 166 ntBASIC5.94□□□□□ -1.46
DKK3Q9UBP4 AC010627.1-201ENST00000503819 1294 ntBASIC5.94□□□□□ -1.46
DKK3Q9UBP4 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 AC118942.1-201ENST00000529674 1035 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms