Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 RNU4-74P-201ENST00000411280 161 ntBASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 AC023128.2-201ENST00000420880 1223 ntBASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 AC064862.5-201ENST00000440618 334 ntBASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 GTF3AP5-201ENST00000442645 697 ntBASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 AL353898.1-201ENST00000444055 238 ntBASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 CDC27P1-201ENST00000445384 715 ntBASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 RNU6-956P-201ENST00000458868 103 ntBASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 AC026348.1-201ENST00000462549 1053 ntBASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 AP003385.3-201ENST00000472498 287 ntBASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 RN7SL612P-201ENST00000497704 295 ntBASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 AC113347.3-201ENST00000509113 148 ntBASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 NACAP5-201ENST00000509863 636 ntBASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 AC093664.1-201ENST00000511779 289 ntBASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 MTCYBP19-201ENST00000517463 1124 ntBASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 MTCO3P15-201ENST00000526563 574 ntBASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 AC245505.1-201ENST00000556398 224 ntBASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 MIR4999-201ENST00000585029 91 ntBASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 U73023.1-201ENST00000603134 700 ntBASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 AC017083.3-201ENST00000609955 700 ntBASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 AC068726.1-201ENST00000610993 341 ntBASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 AC048341.3-201ENST00000619323 491 ntBASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 AC015722.2-201ENST00000622210 551 ntBASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 MIR6503-201ENST00000622884 86 ntBASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 AC073488.9-201ENST00000631601 754 ntBASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 AC087392.3-202ENST00000358446 1754 ntBASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 RBPJP6-201ENST00000411556 1431 ntBASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SEC61A2Q9H9S3 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 AC011504.1-201ENST00000623331 4103 ntBASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 AC093297.3-201ENST00000607056 2517 ntBASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 Y_RNA.41-201ENST00000362646 102 ntBASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 RNA5SP350-201ENST00000363298 111 ntBASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 RNA5SP85-201ENST00000365378 119 ntBASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 AL050335.1-201ENST00000396909 869 ntBASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 DEFB108C-201ENST00000400154 252 ntBASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 AL023284.3-201ENST00000407767 334 ntBASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 RNU6-920P-201ENST00000410926 92 ntBASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 RN7SKP142-201ENST00000411236 328 ntBASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 AK4P4-201ENST00000419465 646 ntBASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 AC003989.1-201ENST00000434569 565 ntBASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 AL031681.1-201ENST00000443304 400 ntBASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 UBBP5-201ENST00000446970 266 ntBASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 SNRPCP11-201ENST00000492453 205 ntBASIC5.78□□□□□ -1.48
SEC61A2Q9H9S3 AL024509.2-201ENST00000493462 493 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms