Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.26□□□□□ -1.41
UPF3BQ9BZI7 AC245028.2-201ENST00000458673 253 ntBASIC6.26□□□□□ -1.41
UPF3BQ9BZI7 AC090142.2-201ENST00000483263 416 ntBASIC6.26□□□□□ -1.41
UPF3BQ9BZI7 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC6.26□□□□□ -1.41
UPF3BQ9BZI7 HIGD1AP14-201ENST00000507617 282 ntBASIC6.26□□□□□ -1.41
UPF3BQ9BZI7 RNA5SP230-201ENST00000517039 122 ntBASIC6.26□□□□□ -1.41
UPF3BQ9BZI7 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
UPF3BQ9BZI7 AC100784.1-201ENST00000522790 310 ntBASIC6.26□□□□□ -1.41
UPF3BQ9BZI7 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.26□□□□□ -1.41
UPF3BQ9BZI7 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
UPF3BQ9BZI7 AL359219.2-201ENST00000555184 348 ntBASIC6.26□□□□□ -1.41
UPF3BQ9BZI7 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.26□□□□□ -1.41
UPF3BQ9BZI7 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
UPF3BQ9BZI7 AC010503.3-201ENST00000594355 540 ntBASIC6.26□□□□□ -1.41
UPF3BQ9BZI7 AC012557.1-201ENST00000607115 611 ntBASIC6.26□□□□□ -1.41
UPF3BQ9BZI7 TRIM51GP-201ENST00000534741 1350 ntBASIC6.26□□□□□ -1.41
UPF3BQ9BZI7 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
UPF3BQ9BZI7 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
UPF3BQ9BZI7 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
UPF3BQ9BZI7 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
UPF3BQ9BZI7 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 MIR105-1-201ENST00000385222 81 ntBASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 NPM1P38-201ENST00000403835 865 ntBASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 RN7SKP16-201ENST00000410180 299 ntBASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 EEF1B2P5-201ENST00000444820 548 ntBASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 RN7SL172P-201ENST00000460535 303 ntBASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 EIF1P7-201ENST00000487533 337 ntBASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 RN7SL547P-201ENST00000490793 290 ntBASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 AC022133.1-201ENST00000490961 571 ntBASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 MYL12BP2-201ENST00000503948 512 ntBASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 RNA5SP228-201ENST00000516232 133 ntBASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 RNU6-941P-201ENST00000516346 108 ntBASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 AC022360.1-201ENST00000521058 340 ntBASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 HMGB1P40-201ENST00000525121 540 ntBASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 AC008814.1-201ENST00000603797 406 ntBASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 SUGT1P3-202ENST00000604259 383 ntBASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 AC005252.1-201ENST00000604518 1063 ntBASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 MIR8080-201ENST00000622224 89 ntBASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
UPF3BQ9BZI7 AC112198.2-201ENST00000426589 6996 ntBASIC6.24□□□□□ -1.41
UPF3BQ9BZI7 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.24□□□□□ -1.41
UPF3BQ9BZI7 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
UPF3BQ9BZI7 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.24□□□□□ -1.41
UPF3BQ9BZI7 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.24□□□□□ -1.41
UPF3BQ9BZI7 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
UPF3BQ9BZI7 RN7SKP153-201ENST00000365026 316 ntBASIC6.24□□□□□ -1.41
UPF3BQ9BZI7 RNA5SP339-201ENST00000390987 122 ntBASIC6.24□□□□□ -1.41
UPF3BQ9BZI7 RNA5SP487-201ENST00000410186 122 ntBASIC6.24□□□□□ -1.41
UPF3BQ9BZI7 RN7SKP213-201ENST00000410746 298 ntBASIC6.24□□□□□ -1.41
UPF3BQ9BZI7 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC6.24□□□□□ -1.41
UPF3BQ9BZI7 AL139148.1-201ENST00000427122 680 ntBASIC6.24□□□□□ -1.41
UPF3BQ9BZI7 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.24□□□□□ -1.41
UPF3BQ9BZI7 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.24□□□□□ -1.41
UPF3BQ9BZI7 CEACAMP7-201ENST00000444105 496 ntBASIC6.24□□□□□ -1.41
UPF3BQ9BZI7 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6.24□□□□□ -1.41
UPF3BQ9BZI7 RPS26P41-201ENST00000450370 284 ntBASIC6.24□□□□□ -1.41
UPF3BQ9BZI7 GAPDHP14-201ENST00000450472 937 ntBASIC6.24□□□□□ -1.41
UPF3BQ9BZI7 AC079168.1-201ENST00000458741 345 ntBASIC6.24□□□□□ -1.41
UPF3BQ9BZI7 DAP3-209ENST00000465375 729 ntTSL 2 BASIC6.24□□□□□ -1.41
UPF3BQ9BZI7 AC005532.2-201ENST00000467154 373 ntBASIC6.24□□□□□ -1.41
UPF3BQ9BZI7 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC6.24□□□□□ -1.41
UPF3BQ9BZI7 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.24□□□□□ -1.41
UPF3BQ9BZI7 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.24□□□□□ -1.41
UPF3BQ9BZI7 AC106730.2-201ENST00000566641 540 ntBASIC6.24□□□□□ -1.41
UPF3BQ9BZI7 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.24□□□□□ -1.41
UPF3BQ9BZI7 RN7SL708P-201ENST00000580952 299 ntBASIC6.24□□□□□ -1.41
UPF3BQ9BZI7 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.24□□□□□ -1.41
UPF3BQ9BZI7 AL049539.1-201ENST00000611964 459 ntBASIC6.24□□□□□ -1.41
UPF3BQ9BZI7 AL359513.1-201ENST00000614364 557 ntBASIC6.24□□□□□ -1.41
UPF3BQ9BZI7 AC105105.5-201ENST00000622635 1294 ntBASIC6.24□□□□□ -1.41
UPF3BQ9BZI7 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.24□□□□□ -1.41
UPF3BQ9BZI7 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
UPF3BQ9BZI7 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.24□□□□□ -1.41
UPF3BQ9BZI7 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.24□□□□□ -1.41
UPF3BQ9BZI7 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 226 ms