Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC7.76□□□□□ -1.17
SCAPERQ9BY12 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC7.76□□□□□ -1.17
SCAPERQ9BY12 AP000919.1-201ENST00000582850 985 ntBASIC7.76□□□□□ -1.17
SCAPERQ9BY12 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC7.76□□□□□ -1.17
SCAPERQ9BY12 AC015799.1-201ENST00000622996 3122 ntBASIC7.76□□□□□ -1.17
SCAPERQ9BY12 AL731532.1-201ENST00000623972 4236 ntBASIC7.76□□□□□ -1.17
SCAPERQ9BY12 AC099654.6-201ENST00000636487 512 ntBASIC7.76□□□□□ -1.17
SCAPERQ9BY12 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.76□□□□□ -1.17
SCAPERQ9BY12 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SCAPERQ9BY12 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC7.75□□□□□ -1.17
SCAPERQ9BY12 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SCAPERQ9BY12 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
SCAPERQ9BY12 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC7.75□□□□□ -1.17
SCAPERQ9BY12 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SCAPERQ9BY12 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SCAPERQ9BY12 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SCAPERQ9BY12 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SCAPERQ9BY12 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC7.75□□□□□ -1.17
SCAPERQ9BY12 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC7.75□□□□□ -1.17
SCAPERQ9BY12 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SCAPERQ9BY12 RNA5-8SP7-201ENST00000363443 155 ntBASIC7.75□□□□□ -1.17
SCAPERQ9BY12 GTF2IP2-201ENST00000424290 697 ntBASIC7.75□□□□□ -1.17
SCAPERQ9BY12 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC7.75□□□□□ -1.17
SCAPERQ9BY12 RN7SL319P-201ENST00000480656 221 ntBASIC7.75□□□□□ -1.17
SCAPERQ9BY12 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC7.75□□□□□ -1.17
SCAPERQ9BY12 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC7.75□□□□□ -1.17
SCAPERQ9BY12 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC7.75□□□□□ -1.17
SCAPERQ9BY12 AL359757.1-201ENST00000623176 255 ntBASIC7.75□□□□□ -1.17
SCAPERQ9BY12 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC7.75□□□□□ -1.17
SCAPERQ9BY12 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SCAPERQ9BY12 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SCAPERQ9BY12 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC7.75□□□□□ -1.17
SCAPERQ9BY12 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SCAPERQ9BY12 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC7.74□□□□□ -1.17
SCAPERQ9BY12 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SCAPERQ9BY12 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC7.74□□□□□ -1.17
SCAPERQ9BY12 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
SCAPERQ9BY12 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SCAPERQ9BY12 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
SCAPERQ9BY12 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SCAPERQ9BY12 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SCAPERQ9BY12 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SCAPERQ9BY12 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC7.74□□□□□ -1.17
SCAPERQ9BY12 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC7.74□□□□□ -1.17
SCAPERQ9BY12 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC7.74□□□□□ -1.17
SCAPERQ9BY12 RPL12P20-201ENST00000475538 479 ntBASIC7.74□□□□□ -1.17
SCAPERQ9BY12 AC010350.1-201ENST00000504908 231 ntBASIC7.74□□□□□ -1.17
SCAPERQ9BY12 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC7.74□□□□□ -1.17
SCAPERQ9BY12 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC7.74□□□□□ -1.17
SCAPERQ9BY12 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC7.74□□□□□ -1.17
SCAPERQ9BY12 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC7.74□□□□□ -1.17
SCAPERQ9BY12 AP001267.4-201ENST00000602598 545 ntBASIC7.74□□□□□ -1.17
SCAPERQ9BY12 AC245389.2-201ENST00000616023 576 ntBASIC7.74□□□□□ -1.17
SCAPERQ9BY12 AC242843.1-201ENST00000618702 573 ntBASIC7.74□□□□□ -1.17
SCAPERQ9BY12 OR52H1-202ENST00000641796 1061 ntBASIC7.74□□□□□ -1.17
SCAPERQ9BY12 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
SCAPERQ9BY12 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC7.74□□□□□ -1.17
SCAPERQ9BY12 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SCAPERQ9BY12 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SCAPERQ9BY12 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
SCAPERQ9BY12 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SCAPERQ9BY12 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC7.74□□□□□ -1.17
SCAPERQ9BY12 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
SCAPERQ9BY12 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
SCAPERQ9BY12 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SCAPERQ9BY12 MSL3P1-202ENST00000440028 1468 ntBASIC7.73□□□□□ -1.17
SCAPERQ9BY12 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC7.73□□□□□ -1.17
SCAPERQ9BY12 AC010928.1-201ENST00000592477 1447 ntBASIC7.73□□□□□ -1.17
SCAPERQ9BY12 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC7.73□□□□□ -1.17
SCAPERQ9BY12 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC7.73□□□□□ -1.17
SCAPERQ9BY12 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC7.73□□□□□ -1.17
SCAPERQ9BY12 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
SCAPERQ9BY12 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
SCAPERQ9BY12 RNU1-74P-201ENST00000384108 171 ntBASIC7.73□□□□□ -1.17
SCAPERQ9BY12 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
SCAPERQ9BY12 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC7.73□□□□□ -1.17
SCAPERQ9BY12 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC7.73□□□□□ -1.17
SCAPERQ9BY12 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC7.73□□□□□ -1.17
SCAPERQ9BY12 NOP56P2-201ENST00000447491 769 ntBASIC7.73□□□□□ -1.17
SCAPERQ9BY12 RPL10P17-201ENST00000453852 316 ntBASIC7.73□□□□□ -1.17
SCAPERQ9BY12 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC7.73□□□□□ -1.17
SCAPERQ9BY12 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC7.73□□□□□ -1.17
SCAPERQ9BY12 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC7.73□□□□□ -1.17
SCAPERQ9BY12 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC7.73□□□□□ -1.17
SCAPERQ9BY12 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SCAPERQ9BY12 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SCAPERQ9BY12 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SCAPERQ9BY12 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.73□□□□□ -1.17
SCAPERQ9BY12 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SCAPERQ9BY12 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC7.73□□□□□ -1.17
SCAPERQ9BY12 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
SCAPERQ9BY12 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
SCAPERQ9BY12 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SCAPERQ9BY12 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
SCAPERQ9BY12 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
SCAPERQ9BY12 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SCAPERQ9BY12 U3.10-201ENST00000364459 214 ntBASIC7.72□□□□□ -1.17
SCAPERQ9BY12 IL6-206ENST00000407492 926 ntTSL 3 BASIC7.72□□□□□ -1.17
SCAPERQ9BY12 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC7.72□□□□□ -1.17
SCAPERQ9BY12 AF186996.5-201ENST00000418098 904 ntBASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms