Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC003992.1-201ENST00000635364 557 ntBASIC7.52□□□□□ -1.21
TRAIPQ9BWF2 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
TRAIPQ9BWF2 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TRAIPQ9BWF2 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
TRAIPQ9BWF2 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.52□□□□□ -1.21
TRAIPQ9BWF2 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TRAIPQ9BWF2 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TRAIPQ9BWF2 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
TRAIPQ9BWF2 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TRAIPQ9BWF2 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.52□□□□□ -1.21
TRAIPQ9BWF2 AP000756.2-201ENST00000624168 2567 ntBASIC7.52□□□□□ -1.21
TRAIPQ9BWF2 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TRAIPQ9BWF2 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 AL359195.2-201ENST00000623657 4412 ntBASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 MIR199B-201ENST00000384849 110 ntBASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 MIR640-201ENST00000385086 96 ntBASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 MT-TH-201ENST00000387441 69 ntBASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 FDPSP5-201ENST00000399474 1057 ntBASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 HYKK-202ENST00000408962 847 ntTSL 5 BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 RN7SKP205-201ENST00000410999 307 ntBASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 AC002069.1-201ENST00000429649 1159 ntBASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 AC010153.1-201ENST00000432862 727 ntBASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 AL137845.2-201ENST00000444292 988 ntBASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 AL360221.1-201ENST00000445989 335 ntBASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 OR52E7P-201ENST00000452394 933 ntBASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 RPS4XP12-201ENST00000461747 709 ntBASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 RN7SL70P-201ENST00000478322 302 ntBASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 UBA52P3-201ENST00000491303 382 ntBASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 RN7SKP196-201ENST00000516267 345 ntBASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 SLC2A13P1-201ENST00000531560 322 ntBASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 OR52K3P-201ENST00000531655 943 ntBASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 NXPE2P1-201ENST00000543705 726 ntBASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 TRAV15-201ENST00000556680 249 ntBASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 HYKK-203ENST00000563233 734 ntTSL 2 BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 AC123786.2-201ENST00000603459 275 ntBASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 MAPK10-287ENST00000641217 3037 ntBASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC7.51□□□□□ -1.21
TRAIPQ9BWF2 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 MAPK10-323ENST00000641493 3207 ntBASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 AL118496.1-201ENST00000440201 1812 ntBASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 ZNF833P-201ENST00000424938 1494 ntBASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 ALB-209ENST00000503124 1741 ntTSL 5 BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 ZNF37BP-203ENST00000452306 1352 ntBASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 LPAL2-203ENST00000454031 2498 ntBASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 RNU6-444P-201ENST00000383988 108 ntBASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 RN7SKP62-201ENST00000384539 329 ntBASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 AC092634.6-201ENST00000418558 192 ntBASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms