Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 PARP4-201ENST00000381989 5474 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 AL360271.1-201ENST00000395679 510 ntBASIC1.92□□□□□ -2.1
HMCN1Q96RW7 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 AC023274.2-201ENST00000445264 521 ntBASIC1.92□□□□□ -2.1
HMCN1Q96RW7 AC009963.4-201ENST00000448535 339 ntBASIC1.92□□□□□ -2.1
HMCN1Q96RW7 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 HSPA8P13-201ENST00000523715 472 ntBASIC1.92□□□□□ -2.1
HMCN1Q96RW7 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 CASP1-216ENST00000534497 825 ntTSL 5 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 NPM1P5-201ENST00000557228 838 ntBASIC1.92□□□□□ -2.1
HMCN1Q96RW7 AADACP1-206ENST00000561502 1193 ntBASIC1.92□□□□□ -2.1
HMCN1Q96RW7 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 MIR4480-201ENST00000582492 71 ntBASIC1.92□□□□□ -2.1
HMCN1Q96RW7 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 RPL27-207ENST00000590864 569 ntTSL 2 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 AL513548.2-201ENST00000602994 1207 ntBASIC1.92□□□□□ -2.1
HMCN1Q96RW7 MRPS35P3-201ENST00000603189 709 ntBASIC1.92□□□□□ -2.1
HMCN1Q96RW7 AP001485.1-201ENST00000604799 199 ntBASIC1.92□□□□□ -2.1
HMCN1Q96RW7 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 DHX29-201ENST00000251636 4502 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 AL136531.3-201ENST00000624378 3658 ntBASIC1.92□□□□□ -2.1
HMCN1Q96RW7 FGFR2-206ENST00000358487 4255 ntAPPRIS ALT1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 SPIN3-211ENST00000638712 4286 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 LPL-201ENST00000311322 3846 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 LGALS8-208ENST00000416919 6097 ntTSL 5 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 OR2B11-202ENST00000641149 6414 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 ATP5E-201ENST00000243997 3665 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 WSB1-201ENST00000262394 5139 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 ABHD18-201ENST00000388795 5450 ntTSL 5 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 ERC1-213ENST00000543086 9241 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 LIN54-202ENST00000442461 4254 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 AF121897.1-201ENST00000411867 3980 ntBASIC1.92□□□□□ -2.1
HMCN1Q96RW7 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 ELP4-218ENST00000639570 5795 ntTSL 5 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 UGT2B26P-201ENST00000508672 1613 ntBASIC1.92□□□□□ -2.1
HMCN1Q96RW7 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 RNU4-70P-201ENST00000384579 139 ntBASIC1.92□□□□□ -2.1
HMCN1Q96RW7 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 RPS3AP23-201ENST00000401762 784 ntBASIC1.92□□□□□ -2.1
HMCN1Q96RW7 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 RPS27AP7-201ENST00000422792 455 ntBASIC1.92□□□□□ -2.1
HMCN1Q96RW7 MTND4LP13-201ENST00000425022 298 ntBASIC1.92□□□□□ -2.1
HMCN1Q96RW7 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 IGKV1OR10-1-201ENST00000442306 329 ntBASIC1.92□□□□□ -2.1
HMCN1Q96RW7 MTCO2P25-201ENST00000447065 681 ntBASIC1.92□□□□□ -2.1
HMCN1Q96RW7 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 GEMIN2P1-201ENST00000454246 752 ntBASIC1.92□□□□□ -2.1
HMCN1Q96RW7 AP002812.1-201ENST00000495378 474 ntBASIC1.92□□□□□ -2.1
HMCN1Q96RW7 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 AC027309.2-201ENST00000520566 192 ntBASIC1.92□□□□□ -2.1
HMCN1Q96RW7 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 AC005014.2-201ENST00000607795 599 ntBASIC1.92□□□□□ -2.1
HMCN1Q96RW7 AC097478.2-201ENST00000610572 514 ntBASIC1.92□□□□□ -2.1
HMCN1Q96RW7 AC011939.3-201ENST00000613686 466 ntBASIC1.92□□□□□ -2.1
HMCN1Q96RW7 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 FRG1EP-201ENST00000634469 770 ntBASIC1.92□□□□□ -2.1
HMCN1Q96RW7 ATM-229ENST00000639953 587 ntTSL 5 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 DNAJC27-AS1-205ENST00000434897 4660 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.92□□□□□ -2.1
HMCN1Q96RW7 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms