Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AL451142.2-201ENST00000429076 2090 ntBASIC5.48□□□□□ -1.53
VMP1Q96GC9 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
VMP1Q96GC9 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VMP1Q96GC9 RNA5SP510-201ENST00000364697 99 ntBASIC5.48□□□□□ -1.53
VMP1Q96GC9 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VMP1Q96GC9 RPS3AP2-201ENST00000407190 754 ntBASIC5.48□□□□□ -1.53
VMP1Q96GC9 RPS29P14-201ENST00000431518 171 ntBASIC5.48□□□□□ -1.53
VMP1Q96GC9 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.48□□□□□ -1.53
VMP1Q96GC9 HMGB1P4-201ENST00000455362 567 ntBASIC5.48□□□□□ -1.53
VMP1Q96GC9 RPL12P24-201ENST00000474907 486 ntBASIC5.48□□□□□ -1.53
VMP1Q96GC9 METTL15P1-201ENST00000481421 1045 ntBASIC5.48□□□□□ -1.53
VMP1Q96GC9 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VMP1Q96GC9 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.48□□□□□ -1.53
VMP1Q96GC9 RNU6-513P-201ENST00000516104 104 ntBASIC5.48□□□□□ -1.53
VMP1Q96GC9 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.48□□□□□ -1.53
VMP1Q96GC9 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.48□□□□□ -1.53
VMP1Q96GC9 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.48□□□□□ -1.53
VMP1Q96GC9 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.48□□□□□ -1.53
VMP1Q96GC9 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.48□□□□□ -1.53
VMP1Q96GC9 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.48□□□□□ -1.53
VMP1Q96GC9 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.48□□□□□ -1.53
VMP1Q96GC9 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.48□□□□□ -1.53
VMP1Q96GC9 AGGF1P7-201ENST00000562369 913 ntBASIC5.48□□□□□ -1.53
VMP1Q96GC9 GARSP1-201ENST00000570895 719 ntBASIC5.48□□□□□ -1.53
VMP1Q96GC9 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.48□□□□□ -1.53
VMP1Q96GC9 AC135803.1-201ENST00000608748 565 ntBASIC5.48□□□□□ -1.53
VMP1Q96GC9 AC116447.1-201ENST00000613153 453 ntBASIC5.48□□□□□ -1.53
VMP1Q96GC9 AC009704.2-201ENST00000618739 483 ntBASIC5.48□□□□□ -1.53
VMP1Q96GC9 AP003497.2-201ENST00000624220 967 ntBASIC5.48□□□□□ -1.53
VMP1Q96GC9 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.48□□□□□ -1.53
VMP1Q96GC9 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VMP1Q96GC9 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VMP1Q96GC9 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.48□□□□□ -1.53
VMP1Q96GC9 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VMP1Q96GC9 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
VMP1Q96GC9 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.48□□□□□ -1.53
VMP1Q96GC9 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.48□□□□□ -1.53
VMP1Q96GC9 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
VMP1Q96GC9 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
VMP1Q96GC9 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
VMP1Q96GC9 PHKBP1-201ENST00000450951 1951 ntBASIC5.47□□□□□ -1.53
VMP1Q96GC9 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
VMP1Q96GC9 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.47□□□□□ -1.53
VMP1Q96GC9 NEPNP-201ENST00000404786 1371 ntBASIC5.47□□□□□ -1.53
VMP1Q96GC9 AL031595.2-201ENST00000624215 19071 ntBASIC5.47□□□□□ -1.53
VMP1Q96GC9 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
VMP1Q96GC9 RN7SKP145-201ENST00000363291 303 ntBASIC5.47□□□□□ -1.53
VMP1Q96GC9 RNU6-304P-201ENST00000364855 107 ntBASIC5.47□□□□□ -1.53
VMP1Q96GC9 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VMP1Q96GC9 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
VMP1Q96GC9 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
VMP1Q96GC9 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.47□□□□□ -1.53
VMP1Q96GC9 AC087752.1-201ENST00000391360 558 ntBASIC5.47□□□□□ -1.53
VMP1Q96GC9 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.47□□□□□ -1.53
VMP1Q96GC9 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
VMP1Q96GC9 AL035696.2-201ENST00000407941 709 ntBASIC5.47□□□□□ -1.53
VMP1Q96GC9 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.47□□□□□ -1.53
VMP1Q96GC9 AK4P4-201ENST00000419465 646 ntBASIC5.47□□□□□ -1.53
VMP1Q96GC9 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.47□□□□□ -1.53
VMP1Q96GC9 AL445528.1-201ENST00000426330 420 ntBASIC5.47□□□□□ -1.53
VMP1Q96GC9 BX323845.3-201ENST00000428215 527 ntBASIC5.47□□□□□ -1.53
VMP1Q96GC9 DEFA9P-201ENST00000433042 285 ntBASIC5.47□□□□□ -1.53
VMP1Q96GC9 AL512637.1-201ENST00000439523 1231 ntBASIC5.47□□□□□ -1.53
VMP1Q96GC9 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.47□□□□□ -1.53
VMP1Q96GC9 AL603882.1-201ENST00000463059 681 ntBASIC5.47□□□□□ -1.53
VMP1Q96GC9 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.47□□□□□ -1.53
VMP1Q96GC9 AF186190.1-201ENST00000517470 480 ntBASIC5.47□□□□□ -1.53
VMP1Q96GC9 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.47□□□□□ -1.53
VMP1Q96GC9 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.47□□□□□ -1.53
VMP1Q96GC9 IGKV2-4-201ENST00000523070 340 ntBASIC5.47□□□□□ -1.53
VMP1Q96GC9 HMGN2P36-201ENST00000529541 409 ntBASIC5.47□□□□□ -1.53
VMP1Q96GC9 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.47□□□□□ -1.53
VMP1Q96GC9 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VMP1Q96GC9 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.47□□□□□ -1.53
VMP1Q96GC9 AC126615.2-201ENST00000553003 515 ntBASIC5.47□□□□□ -1.53
VMP1Q96GC9 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
VMP1Q96GC9 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.47□□□□□ -1.53
VMP1Q96GC9 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.47□□□□□ -1.53
VMP1Q96GC9 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.47□□□□□ -1.53
VMP1Q96GC9 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
VMP1Q96GC9 SS18L2P2-201ENST00000583960 235 ntBASIC5.47□□□□□ -1.53
VMP1Q96GC9 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.47□□□□□ -1.53
VMP1Q96GC9 AL391834.1-201ENST00000609609 560 ntBASIC5.47□□□□□ -1.53
VMP1Q96GC9 AC016911.1-201ENST00000613297 452 ntBASIC5.47□□□□□ -1.53
VMP1Q96GC9 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VMP1Q96GC9 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.47□□□□□ -1.53
VMP1Q96GC9 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
VMP1Q96GC9 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.47□□□□□ -1.53
VMP1Q96GC9 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.47□□□□□ -1.53
VMP1Q96GC9 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
VMP1Q96GC9 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
VMP1Q96GC9 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VMP1Q96GC9 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VMP1Q96GC9 AC000123.3-201ENST00000624029 4975 ntBASIC5.47□□□□□ -1.53
VMP1Q96GC9 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.47□□□□□ -1.53
VMP1Q96GC9 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
VMP1Q96GC9 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.47□□□□□ -1.53
VMP1Q96GC9 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
VMP1Q96GC9 AL360270.2-201ENST00000562952 5985 ntBASIC5.47□□□□□ -1.53
VMP1Q96GC9 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms