Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 SUMO2P4-201ENST00000504193 276 ntBASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 AC011411.1-201ENST00000509592 876 ntBASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 SNORA70.11-201ENST00000515987 138 ntBASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 SNORA70.13-201ENST00000516116 138 ntBASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 SCARNA1-201ENST00000517138 166 ntBASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 SOX5P1-201ENST00000524155 1127 ntBASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 COX6CP7-201ENST00000597056 208 ntBASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 HIRAP1-201ENST00000605318 787 ntBASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 AF129408.1-201ENST00000608767 431 ntBASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 AC104763.3-201ENST00000613765 618 ntBASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 MIR193BHG-214ENST00000641765 509 ntBASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 RNA5SP394-201ENST00000364216 119 ntBASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 LSM5-206ENST00000409987 504 ntTSL 5 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 AL513325.1-201ENST00000417716 1034 ntBASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 NIFKP3-201ENST00000417799 865 ntBASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 RPS26P13-201ENST00000419030 330 ntBASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 AL606495.1-201ENST00000422100 813 ntBASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 CHEK2P5-201ENST00000423877 246 ntBASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 GAPDHP48-201ENST00000436626 961 ntBASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 RPL32P33-201ENST00000487023 394 ntBASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 NAMPTP2-201ENST00000505629 1115 ntBASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 TPT1P8-201ENST00000510120 555 ntBASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 SNORA70.20-201ENST00000516848 126 ntBASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 AC126615.2-201ENST00000553003 515 ntBASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 FAM106CP-201ENST00000582212 507 ntBASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 AC112503.2-201ENST00000609005 552 ntBASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 AP003476.1-201ENST00000623984 516 ntBASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 AC005618.4-201ENST00000625053 554 ntBASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CHMP4CQ96CF2 ZNF90P1-201ENST00000480493 1951 ntBASIC6.84□□□□□ -1.32
CHMP4CQ96CF2 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.32
CHMP4CQ96CF2 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
CHMP4CQ96CF2 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 CASC19-261ENST00000641853 1638 ntBASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms