Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HPS3Q969F9 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HPS3Q969F9 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
HPS3Q969F9 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
HPS3Q969F9 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.35□□□□□ -1.39
HPS3Q969F9 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HPS3Q969F9 AC117409.1-201ENST00000470499 1310 ntBASIC6.35□□□□□ -1.39
HPS3Q969F9 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.35□□□□□ -1.39
HPS3Q969F9 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HPS3Q969F9 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HPS3Q969F9 RNA5SP326-201ENST00000363209 110 ntBASIC6.35□□□□□ -1.39
HPS3Q969F9 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.35□□□□□ -1.39
HPS3Q969F9 RPL22P22-201ENST00000395439 379 ntBASIC6.35□□□□□ -1.39
HPS3Q969F9 CHMP1B2P-201ENST00000399581 597 ntBASIC6.35□□□□□ -1.39
HPS3Q969F9 SNORA79B-201ENST00000410557 148 ntBASIC6.35□□□□□ -1.39
HPS3Q969F9 AC096533.1-201ENST00000411645 353 ntBASIC6.35□□□□□ -1.39
HPS3Q969F9 AC096921.1-201ENST00000411661 375 ntBASIC6.35□□□□□ -1.39
HPS3Q969F9 AL158825.1-201ENST00000414735 521 ntBASIC6.35□□□□□ -1.39
HPS3Q969F9 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.35□□□□□ -1.39
HPS3Q969F9 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HPS3Q969F9 REREP1Y-201ENST00000422655 198 ntBASIC6.35□□□□□ -1.39
HPS3Q969F9 AC115285.1-201ENST00000424879 736 ntBASIC6.35□□□□□ -1.39
HPS3Q969F9 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC6.35□□□□□ -1.39
HPS3Q969F9 NAP1L4P2-201ENST00000425958 899 ntBASIC6.35□□□□□ -1.39
HPS3Q969F9 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.35□□□□□ -1.39
HPS3Q969F9 REREP2Y-201ENST00000439103 200 ntBASIC6.35□□□□□ -1.39
HPS3Q969F9 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HPS3Q969F9 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC6.35□□□□□ -1.39
HPS3Q969F9 AL161722.1-201ENST00000446972 1032 ntBASIC6.35□□□□□ -1.39
HPS3Q969F9 OR7E116P-201ENST00000448529 957 ntBASIC6.35□□□□□ -1.39
HPS3Q969F9 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.35□□□□□ -1.39
HPS3Q969F9 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HPS3Q969F9 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC6.35□□□□□ -1.39
HPS3Q969F9 AC090058.1-201ENST00000498788 435 ntBASIC6.35□□□□□ -1.39
HPS3Q969F9 AC069306.1-201ENST00000507006 843 ntBASIC6.35□□□□□ -1.39
HPS3Q969F9 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.35□□□□□ -1.39
HPS3Q969F9 SCARNA6.1-201ENST00000516989 238 ntBASIC6.35□□□□□ -1.39
HPS3Q969F9 AL049870.4-201ENST00000555741 486 ntBASIC6.35□□□□□ -1.39
HPS3Q969F9 AP000919.1-202ENST00000581139 1264 ntBASIC6.35□□□□□ -1.39
HPS3Q969F9 AC015802.2-201ENST00000589690 189 ntBASIC6.35□□□□□ -1.39
HPS3Q969F9 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.35□□□□□ -1.39
HPS3Q969F9 AL138895.2-201ENST00000603019 178 ntBASIC6.35□□□□□ -1.39
HPS3Q969F9 AC108865.2-201ENST00000606881 432 ntBASIC6.35□□□□□ -1.39
HPS3Q969F9 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.35□□□□□ -1.39
HPS3Q969F9 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HPS3Q969F9 AL512427.1-201ENST00000618593 349 ntBASIC6.35□□□□□ -1.39
HPS3Q969F9 AC129915.3-201ENST00000634128 948 ntBASIC6.35□□□□□ -1.39
HPS3Q969F9 AL590396.4-201ENST00000636779 956 ntBASIC6.35□□□□□ -1.39
HPS3Q969F9 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.35□□□□□ -1.39
HPS3Q969F9 AC006927.2-201ENST00000639256 389 ntBASIC6.35□□□□□ -1.39
HPS3Q969F9 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
HPS3Q969F9 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
HPS3Q969F9 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HPS3Q969F9 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HPS3Q969F9 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HPS3Q969F9 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.35□□□□□ -1.39
HPS3Q969F9 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
HPS3Q969F9 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HPS3Q969F9 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
HPS3Q969F9 AC125336.1-201ENST00000508893 2827 ntBASIC6.35□□□□□ -1.39
HPS3Q969F9 AL592429.1-201ENST00000403909 1473 ntBASIC6.34□□□□□ -1.39
HPS3Q969F9 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
HPS3Q969F9 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.34□□□□□ -1.39
HPS3Q969F9 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HPS3Q969F9 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HPS3Q969F9 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HPS3Q969F9 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HPS3Q969F9 MRE11P1-201ENST00000464884 2127 ntBASIC6.34□□□□□ -1.39
HPS3Q969F9 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HPS3Q969F9 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
HPS3Q969F9 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.34□□□□□ -1.39
HPS3Q969F9 DNM1P47-203ENST00000571780 12667 ntBASIC6.34□□□□□ -1.39
HPS3Q969F9 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
HPS3Q969F9 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.34□□□□□ -1.39
HPS3Q969F9 RNU6-1263P-201ENST00000384601 106 ntBASIC6.34□□□□□ -1.39
HPS3Q969F9 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HPS3Q969F9 RNU4-74P-201ENST00000411280 161 ntBASIC6.34□□□□□ -1.39
HPS3Q969F9 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.34□□□□□ -1.39
HPS3Q969F9 MTCO2P8-201ENST00000412213 658 ntBASIC6.34□□□□□ -1.39
HPS3Q969F9 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6.34□□□□□ -1.39
HPS3Q969F9 METTL15P3-201ENST00000415522 1221 ntBASIC6.34□□□□□ -1.39
HPS3Q969F9 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC6.34□□□□□ -1.39
HPS3Q969F9 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HPS3Q969F9 AC044797.1-201ENST00000445744 679 ntBASIC6.34□□□□□ -1.39
HPS3Q969F9 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.34□□□□□ -1.39
HPS3Q969F9 CYCSP42-201ENST00000450823 238 ntBASIC6.34□□□□□ -1.39
HPS3Q969F9 RPS23P6-201ENST00000466136 431 ntBASIC6.34□□□□□ -1.39
HPS3Q969F9 AC073610.1-201ENST00000489971 396 ntBASIC6.34□□□□□ -1.39
HPS3Q969F9 UBE2V1P12-201ENST00000503954 474 ntBASIC6.34□□□□□ -1.39
HPS3Q969F9 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC6.34□□□□□ -1.39
HPS3Q969F9 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.34□□□□□ -1.39
HPS3Q969F9 AC021451.1-201ENST00000523498 1129 ntBASIC6.34□□□□□ -1.39
HPS3Q969F9 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HPS3Q969F9 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC6.34□□□□□ -1.39
HPS3Q969F9 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.34□□□□□ -1.39
HPS3Q969F9 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.34□□□□□ -1.39
HPS3Q969F9 AP000916.1-201ENST00000533869 835 ntBASIC6.34□□□□□ -1.39
HPS3Q969F9 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.34□□□□□ -1.39
HPS3Q969F9 NANOGNBP2-201ENST00000544753 553 ntBASIC6.34□□□□□ -1.39
HPS3Q969F9 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms