Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.09□□□□□ -1.59
PTP4A1Q93096 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.09□□□□□ -1.59
PTP4A1Q93096 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.09□□□□□ -1.59
PTP4A1Q93096 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.09□□□□□ -1.59
PTP4A1Q93096 MIR4776-2-201ENST00000580204 80 ntBASIC5.09□□□□□ -1.59
PTP4A1Q93096 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.09□□□□□ -1.59
PTP4A1Q93096 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.09□□□□□ -1.59
PTP4A1Q93096 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.09□□□□□ -1.59
PTP4A1Q93096 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.09□□□□□ -1.59
PTP4A1Q93096 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
PTP4A1Q93096 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.09□□□□□ -1.59
PTP4A1Q93096 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.09□□□□□ -1.59
PTP4A1Q93096 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.09□□□□□ -1.59
PTP4A1Q93096 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.09□□□□□ -1.59
PTP4A1Q93096 OR8A1-204ENST00000642111 1145 ntBASIC5.09□□□□□ -1.59
PTP4A1Q93096 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PTP4A1Q93096 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PTP4A1Q93096 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
PTP4A1Q93096 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.6
PTP4A1Q93096 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
PTP4A1Q93096 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
PTP4A1Q93096 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
PTP4A1Q93096 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PTP4A1Q93096 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PTP4A1Q93096 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PTP4A1Q93096 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.08□□□□□ -1.6
PTP4A1Q93096 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
PTP4A1Q93096 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PTP4A1Q93096 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.08□□□□□ -1.6
PTP4A1Q93096 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.08□□□□□ -1.6
PTP4A1Q93096 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PTP4A1Q93096 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PTP4A1Q93096 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PTP4A1Q93096 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PTP4A1Q93096 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
PTP4A1Q93096 AC096656.1-201ENST00000623826 1364 ntBASIC5.08□□□□□ -1.6
PTP4A1Q93096 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PTP4A1Q93096 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PTP4A1Q93096 AC027088.4-201ENST00000611559 1947 ntBASIC5.08□□□□□ -1.6
PTP4A1Q93096 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
PTP4A1Q93096 AC107977.1-201ENST00000355745 939 ntBASIC5.08□□□□□ -1.6
PTP4A1Q93096 RNU6-603P-201ENST00000411403 107 ntBASIC5.08□□□□□ -1.6
PTP4A1Q93096 MRPL53P1-201ENST00000414323 319 ntBASIC5.08□□□□□ -1.6
PTP4A1Q93096 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.08□□□□□ -1.6
PTP4A1Q93096 OR6C64P-201ENST00000419708 825 ntBASIC5.08□□□□□ -1.6
PTP4A1Q93096 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.08□□□□□ -1.6
PTP4A1Q93096 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.08□□□□□ -1.6
PTP4A1Q93096 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.08□□□□□ -1.6
PTP4A1Q93096 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.08□□□□□ -1.6
PTP4A1Q93096 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PTP4A1Q93096 AL512637.1-201ENST00000439523 1231 ntBASIC5.08□□□□□ -1.6
PTP4A1Q93096 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.08□□□□□ -1.6
PTP4A1Q93096 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.08□□□□□ -1.6
PTP4A1Q93096 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
PTP4A1Q93096 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.08□□□□□ -1.6
PTP4A1Q93096 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PTP4A1Q93096 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.08□□□□□ -1.6
PTP4A1Q93096 CST12P-201ENST00000457644 362 ntBASIC5.08□□□□□ -1.6
PTP4A1Q93096 AC092691.2-201ENST00000461787 803 ntBASIC5.08□□□□□ -1.6
PTP4A1Q93096 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.08□□□□□ -1.6
PTP4A1Q93096 AC010627.1-201ENST00000503819 1294 ntBASIC5.08□□□□□ -1.6
PTP4A1Q93096 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PTP4A1Q93096 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PTP4A1Q93096 RNA5SP340-201ENST00000517132 107 ntBASIC5.08□□□□□ -1.6
PTP4A1Q93096 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.08□□□□□ -1.6
PTP4A1Q93096 OR4A17P-201ENST00000526032 904 ntBASIC5.08□□□□□ -1.6
PTP4A1Q93096 PCNAP4-201ENST00000532690 730 ntBASIC5.08□□□□□ -1.6
PTP4A1Q93096 NANOGNBP2-201ENST00000544753 553 ntBASIC5.08□□□□□ -1.6
PTP4A1Q93096 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.08□□□□□ -1.6
PTP4A1Q93096 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.08□□□□□ -1.6
PTP4A1Q93096 AL356801.1-201ENST00000559320 294 ntBASIC5.08□□□□□ -1.6
PTP4A1Q93096 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.08□□□□□ -1.6
PTP4A1Q93096 MTCO3P22-201ENST00000603219 784 ntBASIC5.08□□□□□ -1.6
PTP4A1Q93096 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.08□□□□□ -1.6
PTP4A1Q93096 AL139124.1-201ENST00000609123 421 ntBASIC5.08□□□□□ -1.6
PTP4A1Q93096 uc_338.9-201ENST00000617424 182 ntBASIC5.08□□□□□ -1.6
PTP4A1Q93096 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PTP4A1Q93096 AC007342.8-201ENST00000623278 678 ntBASIC5.08□□□□□ -1.6
PTP4A1Q93096 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PTP4A1Q93096 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PTP4A1Q93096 AC090971.4-201ENST00000560291 1800 ntBASIC5.08□□□□□ -1.6
PTP4A1Q93096 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
PTP4A1Q93096 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PTP4A1Q93096 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PTP4A1Q93096 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PTP4A1Q93096 AC079298.1-201ENST00000625026 1619 ntBASIC5.08□□□□□ -1.6
PTP4A1Q93096 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PTP4A1Q93096 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
PTP4A1Q93096 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.08□□□□□ -1.6
PTP4A1Q93096 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PTP4A1Q93096 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.07□□□□□ -1.6
PTP4A1Q93096 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
PTP4A1Q93096 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PTP4A1Q93096 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PTP4A1Q93096 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PTP4A1Q93096 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PTP4A1Q93096 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PTP4A1Q93096 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PTP4A1Q93096 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PTP4A1Q93096 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms