Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC021087.2-201ENST00000504656 1203 ntBASIC6.63□□□□□ -1.35
ERCC4Q92889 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC6.63□□□□□ -1.35
ERCC4Q92889 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
ERCC4Q92889 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC6.63□□□□□ -1.35
ERCC4Q92889 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
ERCC4Q92889 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.63□□□□□ -1.35
ERCC4Q92889 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC6.63□□□□□ -1.35
ERCC4Q92889 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC6.63□□□□□ -1.35
ERCC4Q92889 AC007346.2-201ENST00000564816 892 ntBASIC6.63□□□□□ -1.35
ERCC4Q92889 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.63□□□□□ -1.35
ERCC4Q92889 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.63□□□□□ -1.35
ERCC4Q92889 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.63□□□□□ -1.35
ERCC4Q92889 AC069304.3-201ENST00000603938 1084 ntBASIC6.63□□□□□ -1.35
ERCC4Q92889 uc_338.29-201ENST00000615099 168 ntBASIC6.63□□□□□ -1.35
ERCC4Q92889 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.63□□□□□ -1.35
ERCC4Q92889 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.63□□□□□ -1.35
ERCC4Q92889 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.63□□□□□ -1.35
ERCC4Q92889 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.63□□□□□ -1.35
ERCC4Q92889 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
ERCC4Q92889 OR11H2-202ENST00000641517 1085 ntBASIC6.63□□□□□ -1.35
ERCC4Q92889 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
ERCC4Q92889 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ERCC4Q92889 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ERCC4Q92889 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
ERCC4Q92889 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ERCC4Q92889 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
ERCC4Q92889 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
ERCC4Q92889 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.62□□□□□ -1.35
ERCC4Q92889 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.62□□□□□ -1.35
ERCC4Q92889 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ERCC4Q92889 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.62□□□□□ -1.35
ERCC4Q92889 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
ERCC4Q92889 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ERCC4Q92889 RN7SKP171-201ENST00000364417 303 ntBASIC6.62□□□□□ -1.35
ERCC4Q92889 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.62□□□□□ -1.35
ERCC4Q92889 AL445183.3-201ENST00000414168 502 ntBASIC6.62□□□□□ -1.35
ERCC4Q92889 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC6.62□□□□□ -1.35
ERCC4Q92889 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.62□□□□□ -1.35
ERCC4Q92889 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC6.62□□□□□ -1.35
ERCC4Q92889 RPL12P12-201ENST00000424633 501 ntBASIC6.62□□□□□ -1.35
ERCC4Q92889 DNAJA1P1-201ENST00000425106 1187 ntBASIC6.62□□□□□ -1.35
ERCC4Q92889 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.62□□□□□ -1.35
ERCC4Q92889 RPL12P18-201ENST00000437175 325 ntBASIC6.62□□□□□ -1.35
ERCC4Q92889 AC010240.2-201ENST00000445363 1205 ntBASIC6.62□□□□□ -1.35
ERCC4Q92889 RPL6P5-201ENST00000445678 828 ntBASIC6.62□□□□□ -1.35
ERCC4Q92889 TIMM8BP2-201ENST00000445940 251 ntBASIC6.62□□□□□ -1.35
ERCC4Q92889 PPIAP7-201ENST00000454070 489 ntBASIC6.62□□□□□ -1.35
ERCC4Q92889 AC019084.1-201ENST00000457337 432 ntBASIC6.62□□□□□ -1.35
ERCC4Q92889 RN7SL269P-201ENST00000467795 305 ntBASIC6.62□□□□□ -1.35
ERCC4Q92889 TPT1P3-201ENST00000492841 512 ntBASIC6.62□□□□□ -1.35
ERCC4Q92889 GOLGA5P1-201ENST00000507317 980 ntBASIC6.62□□□□□ -1.35
ERCC4Q92889 AC113420.1-201ENST00000507903 571 ntBASIC6.62□□□□□ -1.35
ERCC4Q92889 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.62□□□□□ -1.35
ERCC4Q92889 AC147055.3-201ENST00000510547 851 ntBASIC6.62□□□□□ -1.35
ERCC4Q92889 AC133963.2-201ENST00000513686 578 ntBASIC6.62□□□□□ -1.35
ERCC4Q92889 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.62□□□□□ -1.35
ERCC4Q92889 MRPS36P3-201ENST00000519284 130 ntBASIC6.62□□□□□ -1.35
ERCC4Q92889 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.62□□□□□ -1.35
ERCC4Q92889 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC6.62□□□□□ -1.35
ERCC4Q92889 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC6.62□□□□□ -1.35
ERCC4Q92889 AP000620.1-201ENST00000527147 504 ntBASIC6.62□□□□□ -1.35
ERCC4Q92889 EMP1-206ENST00000537612 505 ntTSL 3 BASIC6.62□□□□□ -1.35
ERCC4Q92889 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.62□□□□□ -1.35
ERCC4Q92889 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.62□□□□□ -1.35
ERCC4Q92889 GARSP1-201ENST00000570895 719 ntBASIC6.62□□□□□ -1.35
ERCC4Q92889 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.62□□□□□ -1.35
ERCC4Q92889 AC060780.2-201ENST00000589047 198 ntBASIC6.62□□□□□ -1.35
ERCC4Q92889 AC068768.2-201ENST00000602352 343 ntBASIC6.62□□□□□ -1.35
ERCC4Q92889 AL592494.3-201ENST00000609485 464 ntBASIC6.62□□□□□ -1.35
ERCC4Q92889 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC6.62□□□□□ -1.35
ERCC4Q92889 AC022400.9-201ENST00000623633 273 ntBASIC6.62□□□□□ -1.35
ERCC4Q92889 AL512506.2-201ENST00000624472 458 ntBASIC6.62□□□□□ -1.35
ERCC4Q92889 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
ERCC4Q92889 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
ERCC4Q92889 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
ERCC4Q92889 AP004607.3-201ENST00000530354 3915 ntBASIC6.62□□□□□ -1.35
ERCC4Q92889 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.62□□□□□ -1.35
ERCC4Q92889 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.61□□□□□ -1.35
ERCC4Q92889 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.61□□□□□ -1.35
ERCC4Q92889 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.61□□□□□ -1.35
ERCC4Q92889 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
ERCC4Q92889 Z83820.1-201ENST00000456978 1499 ntBASIC6.61□□□□□ -1.35
ERCC4Q92889 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.61□□□□□ -1.35
ERCC4Q92889 AL359715.4-201ENST00000606629 1436 ntBASIC6.61□□□□□ -1.35
ERCC4Q92889 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
ERCC4Q92889 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ERCC4Q92889 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
ERCC4Q92889 RN7SKP128-201ENST00000364270 303 ntBASIC6.61□□□□□ -1.35
ERCC4Q92889 RN7SKP78-201ENST00000364711 318 ntBASIC6.61□□□□□ -1.35
ERCC4Q92889 RNA5SP279-201ENST00000365513 117 ntBASIC6.61□□□□□ -1.35
ERCC4Q92889 MIR513B-201ENST00000385136 84 ntBASIC6.61□□□□□ -1.35
ERCC4Q92889 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ERCC4Q92889 AL096711.1-201ENST00000404780 554 ntBASIC6.61□□□□□ -1.35
ERCC4Q92889 SLC20A1P1-201ENST00000413906 956 ntBASIC6.61□□□□□ -1.35
ERCC4Q92889 RPS24P7-201ENST00000416921 246 ntBASIC6.61□□□□□ -1.35
ERCC4Q92889 AL354766.1-201ENST00000423396 542 ntBASIC6.61□□□□□ -1.35
ERCC4Q92889 AL139158.1-201ENST00000424719 340 ntBASIC6.61□□□□□ -1.35
ERCC4Q92889 AC099677.3-201ENST00000427081 395 ntBASIC6.61□□□□□ -1.35
ERCC4Q92889 AL353662.1-201ENST00000439099 327 ntBASIC6.61□□□□□ -1.35
ERCC4Q92889 RPSAP40-201ENST00000442343 891 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms