Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AC105384.2-201ENST00000508433 640 ntBASIC5.22□□□□□ -1.57
TM9SF4Q92544 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.22□□□□□ -1.57
TM9SF4Q92544 GAPDHP62-201ENST00000515313 990 ntBASIC5.22□□□□□ -1.57
TM9SF4Q92544 AC104997.1-201ENST00000519761 717 ntBASIC5.22□□□□□ -1.57
TM9SF4Q92544 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.22□□□□□ -1.57
TM9SF4Q92544 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.22□□□□□ -1.57
TM9SF4Q92544 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.22□□□□□ -1.57
TM9SF4Q92544 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.22□□□□□ -1.57
TM9SF4Q92544 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.22□□□□□ -1.57
TM9SF4Q92544 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.22□□□□□ -1.57
TM9SF4Q92544 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.22□□□□□ -1.57
TM9SF4Q92544 BNIP3P39-201ENST00000601077 554 ntBASIC5.22□□□□□ -1.57
TM9SF4Q92544 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.22□□□□□ -1.57
TM9SF4Q92544 MIR6133-201ENST00000617057 108 ntBASIC5.22□□□□□ -1.57
TM9SF4Q92544 AC132068.1-201ENST00000623805 459 ntBASIC5.22□□□□□ -1.57
TM9SF4Q92544 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
TM9SF4Q92544 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TM9SF4Q92544 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
TM9SF4Q92544 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
TM9SF4Q92544 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
TM9SF4Q92544 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TM9SF4Q92544 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
TM9SF4Q92544 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TM9SF4Q92544 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TM9SF4Q92544 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.22□□□□□ -1.57
TM9SF4Q92544 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.22□□□□□ -1.57
TM9SF4Q92544 FBXL21-201ENST00000297158 1305 ntBASIC5.22□□□□□ -1.57
TM9SF4Q92544 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.22□□□□□ -1.57
TM9SF4Q92544 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
TM9SF4Q92544 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TM9SF4Q92544 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TM9SF4Q92544 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.21□□□□□ -1.58
TM9SF4Q92544 RNA5SP507-201ENST00000363603 121 ntBASIC5.21□□□□□ -1.58
TM9SF4Q92544 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
TM9SF4Q92544 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TM9SF4Q92544 CBX1P3-201ENST00000413296 527 ntBASIC5.21□□□□□ -1.58
TM9SF4Q92544 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.21□□□□□ -1.58
TM9SF4Q92544 AC079809.1-201ENST00000415468 276 ntBASIC5.21□□□□□ -1.58
TM9SF4Q92544 HSFY1P1-201ENST00000423928 1178 ntBASIC5.21□□□□□ -1.58
TM9SF4Q92544 RPL17P35-201ENST00000432217 549 ntBASIC5.21□□□□□ -1.58
TM9SF4Q92544 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.21□□□□□ -1.58
TM9SF4Q92544 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.21□□□□□ -1.58
TM9SF4Q92544 AL450023.1-201ENST00000450868 751 ntBASIC5.21□□□□□ -1.58
TM9SF4Q92544 AL645937.3-201ENST00000453647 936 ntBASIC5.21□□□□□ -1.58
TM9SF4Q92544 RPL7P45-201ENST00000455851 743 ntBASIC5.21□□□□□ -1.58
TM9SF4Q92544 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.21□□□□□ -1.58
TM9SF4Q92544 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.21□□□□□ -1.58
TM9SF4Q92544 AC021146.10-201ENST00000515628 706 ntBASIC5.21□□□□□ -1.58
TM9SF4Q92544 SNORA70.17-201ENST00000516449 133 ntBASIC5.21□□□□□ -1.58
TM9SF4Q92544 RN7SKP5-201ENST00000517045 272 ntBASIC5.21□□□□□ -1.58
TM9SF4Q92544 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.21□□□□□ -1.58
TM9SF4Q92544 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.21□□□□□ -1.58
TM9SF4Q92544 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.21□□□□□ -1.58
TM9SF4Q92544 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC5.21□□□□□ -1.58
TM9SF4Q92544 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.21□□□□□ -1.58
TM9SF4Q92544 MTND2P13-201ENST00000577438 1039 ntBASIC5.21□□□□□ -1.58
TM9SF4Q92544 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.21□□□□□ -1.58
TM9SF4Q92544 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.21□□□□□ -1.58
TM9SF4Q92544 AC006363.1-201ENST00000603806 463 ntBASIC5.21□□□□□ -1.58
TM9SF4Q92544 HIRAP1-201ENST00000605318 787 ntBASIC5.21□□□□□ -1.58
TM9SF4Q92544 NANOGP3-201ENST00000605855 286 ntBASIC5.21□□□□□ -1.58
TM9SF4Q92544 AL512506.1-201ENST00000613918 449 ntBASIC5.21□□□□□ -1.58
TM9SF4Q92544 RPSAP73-201ENST00000614820 330 ntBASIC5.21□□□□□ -1.58
TM9SF4Q92544 AL162233.1-201ENST00000620014 944 ntBASIC5.21□□□□□ -1.58
TM9SF4Q92544 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.21□□□□□ -1.58
TM9SF4Q92544 MAPK10-338ENST00000641647 3362 ntBASIC5.21□□□□□ -1.58
TM9SF4Q92544 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.21□□□□□ -1.58
TM9SF4Q92544 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.21□□□□□ -1.58
TM9SF4Q92544 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.21□□□□□ -1.58
TM9SF4Q92544 MAPK10-328ENST00000641553 4009 ntBASIC5.21□□□□□ -1.58
TM9SF4Q92544 AC073429.2-201ENST00000569694 1444 ntBASIC5.21□□□□□ -1.58
TM9SF4Q92544 AC007842.1-201ENST00000597336 2039 ntBASIC5.21□□□□□ -1.58
TM9SF4Q92544 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TM9SF4Q92544 AC068870.3-201ENST00000625077 2536 ntBASIC5.21□□□□□ -1.58
TM9SF4Q92544 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
TM9SF4Q92544 AC235565.1-201ENST00000456962 1325 ntBASIC5.21□□□□□ -1.58
TM9SF4Q92544 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TM9SF4Q92544 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
TM9SF4Q92544 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TM9SF4Q92544 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.2□□□□□ -1.58
TM9SF4Q92544 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TM9SF4Q92544 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TM9SF4Q92544 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.2□□□□□ -1.58
TM9SF4Q92544 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TM9SF4Q92544 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
TM9SF4Q92544 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TM9SF4Q92544 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TM9SF4Q92544 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TM9SF4Q92544 SNORA58B-201ENST00000364259 136 ntBASIC5.2□□□□□ -1.58
TM9SF4Q92544 RNA5SP30-201ENST00000365552 115 ntBASIC5.2□□□□□ -1.58
TM9SF4Q92544 RNU1-136P-201ENST00000384181 164 ntBASIC5.2□□□□□ -1.58
TM9SF4Q92544 RNA5SP187-201ENST00000384400 119 ntBASIC5.2□□□□□ -1.58
TM9SF4Q92544 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TM9SF4Q92544 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TM9SF4Q92544 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.2□□□□□ -1.58
TM9SF4Q92544 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.2□□□□□ -1.58
TM9SF4Q92544 NANOGP4-201ENST00000427230 913 ntBASIC5.2□□□□□ -1.58
TM9SF4Q92544 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.2□□□□□ -1.58
TM9SF4Q92544 CYCSP12-201ENST00000437729 300 ntBASIC5.2□□□□□ -1.58
TM9SF4Q92544 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms