Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 AL022067.1-201ENST00000602426 454 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 FAM27E4-201ENST00000605259 342 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 Z99289.3-201ENST00000605586 594 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 AC009120.7-201ENST00000623452 780 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 AC004777.1-201ENST00000624317 287 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 AC019226.2-201ENST00000625973 424 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 CU459211.1-201ENST00000635667 749 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 MTND2P41-201ENST00000637599 773 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.84□□□□□ -1.48
ATG4AQ8WYN0 AC007842.1-201ENST00000597336 2039 ntBASIC5.84□□□□□ -1.48
ATG4AQ8WYN0 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.84□□□□□ -1.48
ATG4AQ8WYN0 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.84□□□□□ -1.48
ATG4AQ8WYN0 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 AC016745.2-201ENST00000608834 3443 ntBASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 AC008432.1-201ENST00000615912 1320 ntBASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 GAPDHP24-201ENST00000328713 983 ntBASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 RNA5SP477-201ENST00000362639 119 ntBASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 TAS2R15P-201ENST00000390674 928 ntBASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 RPSAP35-201ENST00000413753 818 ntBASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 AL592310.1-201ENST00000414330 671 ntBASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 XKRYP1-201ENST00000423438 492 ntBASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 AC009784.1-201ENST00000426484 460 ntBASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 RPS27AP6-201ENST00000427962 448 ntBASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 XKRYP2-201ENST00000432915 492 ntBASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 RPS7P2-201ENST00000435134 607 ntBASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 FABP5P3-201ENST00000437960 408 ntBASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 AMYP1-201ENST00000440059 1023 ntBASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 AC092473.1-201ENST00000441098 221 ntBASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 Z77249.1-201ENST00000444622 1175 ntBASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 RPL6P5-201ENST00000445678 828 ntBASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 TIMM8BP2-201ENST00000445940 251 ntBASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 EIF2S2P2-201ENST00000447161 982 ntBASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 RN7SL570P-201ENST00000484405 292 ntBASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 AC010627.1-201ENST00000503819 1294 ntBASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 DUTP7-201ENST00000507982 486 ntBASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 SCARNA6.1-201ENST00000516989 238 ntBASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 AC021678.3-201ENST00000517893 476 ntBASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 AL845552.1-201ENST00000556820 323 ntBASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 AL450336.1-201ENST00000605180 586 ntBASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 AL157392.4-201ENST00000609756 345 ntBASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 AC108359.1-201ENST00000616451 1211 ntBASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 AL683826.1-201ENST00000624104 627 ntBASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 AC132825.7-201ENST00000638744 335 ntBASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 OR8A1-204ENST00000642111 1145 ntBASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 AC130360.2-201ENST00000533477 1556 ntBASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 CR788268.1-201ENST00000603931 1809 ntBASIC5.83□□□□□ -1.48
ATG4AQ8WYN0 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms