Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 MRPS6P2-201ENST00000381143 370 ntBASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 RNU6-1200P-201ENST00000384162 107 ntBASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 Y_RNA.554-201ENST00000384672 102 ntBASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 FGF7P8-201ENST00000402994 292 ntBASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 AL139098.1-201ENST00000407291 389 ntBASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 RNU6-757P-201ENST00000410334 100 ntBASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 RNA5SP198-201ENST00000410376 127 ntBASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 RN7SKP271-201ENST00000410528 320 ntBASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 RN7SKP296-201ENST00000411185 341 ntBASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 RPL7P8-201ENST00000411964 730 ntBASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 UBTFL3-201ENST00000418934 1024 ntBASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 VN1R20P-201ENST00000425215 966 ntBASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 RPL6P30-201ENST00000443382 862 ntBASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 MTCYBP42-201ENST00000444653 1130 ntBASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 ST13P20-201ENST00000447996 1065 ntBASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 MTND1P18-201ENST00000448191 573 ntBASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 MTND1P11-201ENST00000456661 876 ntBASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 AC109486.1-201ENST00000486833 374 ntBASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 FAM92A1P2-202ENST00000504766 877 ntBASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 AC024589.1-201ENST00000512207 263 ntBASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 CENPUP1-201ENST00000526649 1202 ntBASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 AC116553.2-201ENST00000564203 463 ntBASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 RN7SL270P-201ENST00000579643 281 ntBASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 SYPL1P2-201ENST00000582878 727 ntBASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 MIR4310-201ENST00000582950 57 ntBASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 uc_338.31-201ENST00000615595 186 ntBASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 AL136221.1-201ENST00000621449 509 ntBASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 CLCA3P-203ENST00000490028 2781 ntBASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 AP000641.1-201ENST00000531988 1639 ntBASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 AL137100.1-201ENST00000556703 1620 ntBASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 Z93929.1-201ENST00000418200 1475 ntBASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 ZNF849P-201ENST00000594711 1566 ntBASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 OR56B2P-201ENST00000317102 954 ntBASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 ZBTB8OSP1-201ENST00000342688 498 ntBASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 RNU6-1042P-201ENST00000384204 107 ntBASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 Y_RNA.465-201ENST00000384293 102 ntBASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 RNA5SP431-201ENST00000410312 120 ntBASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 AL929472.1-201ENST00000417484 429 ntBASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 DNAJA1P2-201ENST00000421360 1197 ntBASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 AC000111.3-201ENST00000433478 193 ntBASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms