Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC112Q8NEF3 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC112Q8NEF3 MIR6826-201ENST00000617808 98 ntBASIC5.77□□□□□ -1.49
CCDC112Q8NEF3 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC112Q8NEF3 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC112Q8NEF3 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC112Q8NEF3 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC112Q8NEF3 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC112Q8NEF3 AC027279.1-201ENST00000568885 4284 ntBASIC5.77□□□□□ -1.49
CCDC112Q8NEF3 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC112Q8NEF3 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CCDC112Q8NEF3 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC112Q8NEF3 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 RNF19BPY-201ENST00000458209 1550 ntBASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 AC019072.1-201ENST00000604535 1551 ntBASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 AC021242.1-201ENST00000507315 2035 ntBASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 RNA5SP242-201ENST00000364171 118 ntBASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 GAPDHP42-201ENST00000406848 981 ntBASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 AC016769.2-201ENST00000414815 475 ntBASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 AL121776.1-201ENST00000429337 372 ntBASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 NPM1P33-201ENST00000438918 872 ntBASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 AL512637.1-201ENST00000439523 1231 ntBASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 AC064862.4-201ENST00000442180 334 ntBASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 RPSAP39-201ENST00000467439 883 ntBASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 RNA5SP464-201ENST00000516251 108 ntBASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 AC009597.2-201ENST00000604659 592 ntBASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 AL139407.1-201ENST00000613826 1175 ntBASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 AC087565.3-203ENST00000641018 837 ntBASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CCDC112Q8NEF3 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC112Q8NEF3 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC112Q8NEF3 RARSP1-201ENST00000542842 1418 ntBASIC5.75□□□□□ -1.49
CCDC112Q8NEF3 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CCDC112Q8NEF3 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC112Q8NEF3 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC112Q8NEF3 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC112Q8NEF3 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
CCDC112Q8NEF3 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC112Q8NEF3 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC112Q8NEF3 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC112Q8NEF3 RN7SKP125-201ENST00000410481 302 ntBASIC5.75□□□□□ -1.49
CCDC112Q8NEF3 Z68694.1-201ENST00000413929 841 ntBASIC5.75□□□□□ -1.49
CCDC112Q8NEF3 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC112Q8NEF3 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC112Q8NEF3 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC112Q8NEF3 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC112Q8NEF3 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC112Q8NEF3 AP000547.1-201ENST00000454360 617 ntBASIC5.75□□□□□ -1.49
CCDC112Q8NEF3 AC023141.9-201ENST00000458734 412 ntBASIC5.75□□□□□ -1.49
CCDC112Q8NEF3 AL162431.4-201ENST00000604674 411 ntBASIC5.75□□□□□ -1.49
CCDC112Q8NEF3 RN7SL787P-201ENST00000613000 284 ntBASIC5.75□□□□□ -1.49
CCDC112Q8NEF3 AC004477.3-201ENST00000614061 590 ntBASIC5.75□□□□□ -1.49
CCDC112Q8NEF3 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC112Q8NEF3 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.75□□□□□ -1.49
CCDC112Q8NEF3 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.75□□□□□ -1.49
CCDC112Q8NEF3 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC112Q8NEF3 MAPK10-349ENST00000641767 3661 ntBASIC5.75□□□□□ -1.49
CCDC112Q8NEF3 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC112Q8NEF3 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC112Q8NEF3 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC112Q8NEF3 MTCO1P7-201ENST00000419523 1542 ntBASIC5.74□□□□□ -1.49
CCDC112Q8NEF3 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC112Q8NEF3 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC112Q8NEF3 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC112Q8NEF3 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC112Q8NEF3 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC112Q8NEF3 AL513325.1-201ENST00000417716 1034 ntBASIC5.74□□□□□ -1.49
CCDC112Q8NEF3 AC127526.2-201ENST00000426436 775 ntBASIC5.74□□□□□ -1.49
CCDC112Q8NEF3 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC112Q8NEF3 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC112Q8NEF3 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.74□□□□□ -1.49
CCDC112Q8NEF3 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC112Q8NEF3 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC112Q8NEF3 RPL5P22-201ENST00000480199 884 ntBASIC5.74□□□□□ -1.49
CCDC112Q8NEF3 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC112Q8NEF3 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC112Q8NEF3 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.74□□□□□ -1.49
CCDC112Q8NEF3 AC027026.1-201ENST00000532323 742 ntBASIC5.74□□□□□ -1.49
CCDC112Q8NEF3 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC112Q8NEF3 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms